Annotations: 2W0C

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	F_UNCLASSIFIED	e2w0cA2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: F_UNCLASSIFIED	ECOD (1.6)
A	PF18628	e2w0cA1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF18628	ECOD (1.6)
B	F_UNCLASSIFIED	e2w0cB2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: F_UNCLASSIFIED	ECOD (1.6)
B	PF18628	e2w0cB1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF18628	ECOD (1.6)
C	F_UNCLASSIFIED	e2w0cC2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: F_UNCLASSIFIED	ECOD (1.6)
C	PF18628	e2w0cC1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF18628	ECOD (1.6)
D	F_UNCLASSIFIED	e2w0cD2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: F_UNCLASSIFIED	ECOD (1.6)
D	PF18628	e2w0cD1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF18628	ECOD (1.6)
E	F_UNCLASSIFIED	e2w0cE2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: F_UNCLASSIFIED	ECOD (1.6)
E	PF18628	e2w0cE1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF18628	ECOD (1.6)
F	F_UNCLASSIFIED	e2w0cF2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: F_UNCLASSIFIED	ECOD (1.6)
F	PF18628	e2w0cF1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF18628	ECOD (1.6)
G	F_UNCLASSIFIED	e2w0cG2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: F_UNCLASSIFIED	ECOD (1.6)
G	PF18628	e2w0cG1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF18628	ECOD (1.6)
H	F_UNCLASSIFIED	e2w0cH2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: F_UNCLASSIFIED	ECOD (1.6)
H	PF18628	e2w0cH1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF18628	ECOD (1.6)
I	F_UNCLASSIFIED	e2w0cI2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: F_UNCLASSIFIED	ECOD (1.6)
I	PF18628	e2w0cI1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF18628	ECOD (1.6)
J	F_UNCLASSIFIED	e2w0cJ2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: F_UNCLASSIFIED	ECOD (1.6)
J	PF18628	e2w0cJ1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF18628	ECOD (1.6)
K [auth L]	PF22188	e2w0cL3	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF22188	ECOD (1.6)
K [auth L]	PF22464	e2w0cL1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF22464	ECOD (1.6)
K [auth L]	PF22465	e2w0cL2	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: PF22465	ECOD (1.6)
L [auth P]	PF20812	e2w0cP1	A: extended segments	X: Viral membrane protein P3 (From Topology)	H: Viral membrane protein P3 (From Topology)	T: Viral membrane protein P3	F: PF20812	ECOD (1.6)
M [auth Q]	PF20812	e2w0cQ1	A: extended segments	X: Viral membrane protein P3 (From Topology)	H: Viral membrane protein P3 (From Topology)	T: Viral membrane protein P3	F: PF20812	ECOD (1.6)
N [auth R]	PF20812	e2w0cR1	A: extended segments	X: Viral membrane protein P3 (From Topology)	H: Viral membrane protein P3 (From Topology)	T: Viral membrane protein P3	F: PF20812	ECOD (1.6)
O [auth S]	PF20812	e2w0cS1	A: extended segments	X: Viral membrane protein P3 (From Topology)	H: Viral membrane protein P3 (From Topology)	T: Viral membrane protein P3	F: PF20812	ECOD (1.6)
P [auth T]	F_UNCLASSIFIED	e2w0cT1	A: extended segments	X: Viral membrane protein P6 (From Topology)	H: Viral membrane protein P6 (From Topology)	T: Viral membrane protein P6	F: F_UNCLASSIFIED	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	PF18628	Viral coat protein P2 N-terminal domain (P2_N)	Viral coat protein P2 N-terminal domain	P2 (30.2 kDa) is the major outer-coat protein of the marine lipid-containing bacteriophage PM2. Each sub-unit of P2 is composed of two beta barrel jelly rolls, disposed normal to the surface of the capsid, which lend pseudo-6-fold symmetry to the mol ...	P2 (30.2 kDa) is the major outer-coat protein of the marine lipid-containing bacteriophage PM2. Each sub-unit of P2 is composed of two beta barrel jelly rolls, disposed normal to the surface of the capsid, which lend pseudo-6-fold symmetry to the molecules, facilitating their close packing within the capsid. There is a Ca2+ ion located between the two beta barrels of P2 that helps PM2 molecular organizations stabilization. This entry represents the N-terminal jelly roll domain of P2 [1].	Domain
L [auth P], M [auth Q], N [auth R], O [auth S]	PF20812	Bacteriophage PM2, Viral membrane protein P3 (PM2_P3)	Bacteriophage PM2, Viral membrane protein P3	Viral membrane protein P3 assemblies into dimers. Each P3 subunit comprise a core of two perpendicular alpha helices, and subunits are bound together by a parallel two-stranded beta sheet. 120 asymmetric dimers form a layer below the outer capsid ...	Viral membrane protein P3 assemblies into dimers. Each P3 subunit comprise a core of two perpendicular alpha helices, and subunits are bound together by a parallel two-stranded beta sheet. 120 asymmetric dimers form a layer below the outer capsid shell in an almost planar structure. This protein family is found in Bacteriophage PM2 and similar PRD1-adenovirus [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	MAJOR CAPSID PROTEIN P2	-	-	viral capsid capsomere virion component viral capsid, major subunit
K [auth L]	PROTEIN 2	-	-	virion component
L [auth P], M [auth Q], N [auth R], O [auth S]	PROTEIN P3	-	-	membrane cellular anatomical entity virion component viral membrane viral inner membrane virion membrane
P [auth T]	PROTEIN P6	-	-	membrane cellular anatomical entity virion component viral membrane viral inner membrane virion membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR041377	Viral coat protein P2, N-terminal	Domain
L [auth P], M [auth Q], N [auth R], O [auth S]	IPR048973	Bacteriophage PM2 P3 protein-like	Family