2QOJ
Coevolution of a homing endonuclease and its host target sequence
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth Z] | d2qojz1 | Alpha and beta proteins (a+b) | Homing endonuclease-like | Homing endonucleases | Group I mobile intron endonuclease | DNA endonuclease I-AniI | Aspergillus nidulans (Aspergillus nidulans FGSC A4 ) [TaxId: 227321 ], | SCOPe (2.08) |
A [auth Z] | d2qojz3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | Aspergillus nidulans (Aspergillus nidulans FGSC A4 ) [TaxId: 227321 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth Z] | SCOP2B Superfamily | Homing endonucleases | 8038418 | 3000266 | SCOP2B (2022-06-29) |
A [auth Z] | SCOP2B Superfamily | Homing endonucleases | 8038417 | 3000266 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth Z] | PF00961 | e2qojZ1 | A: a+b two layers | X: Homing endonucleases-like | H: Homing endonucleases (From Topology) | T: Homing endonucleases | F: PF00961 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth Z] | 3.10.28.10 | Alpha Beta | Roll | Endonuclease I-creI | Homing endonucleases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth Z] | PF00961 | LAGLIDADG endonuclease (LAGLIDADG_1) | LAGLIDADG endonuclease | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth Z] | IPR027387 | Cytochrome b/b6-like domain superfamily | Homologous Superfamily |
A [auth Z] | IPR016174 | Di-haem cytochrome, transmembrane | Homologous Superfamily |
A [auth Z] | IPR004860 | Homing endonuclease, LAGLIDADG | Domain |
A [auth Z] | IPR048259 | Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial | Domain |
A [auth Z] | IPR027434 | Homing endonuclease | Homologous Superfamily |
A [auth Z] | IPR005797 | Cytochrome b/b6, N-terminal domain | Domain |