2J6Y

Structural and Functional Characterisation of partner switching regulating the environmental stress response in Bacillus subtilis

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2j6ya_	All alpha proteins	KaiA/RbsU domain	KaiA/RbsU domain	Phosphoserine phosphatase RsbU, N-terminal domain	automated matches	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
B	d2j6yb_	All alpha proteins	KaiA/RbsU domain	KaiA/RbsU domain	Phosphoserine phosphatase RsbU, N-terminal domain	automated matches	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
C	d2j6yc_	All alpha proteins	KaiA/RbsU domain	KaiA/RbsU domain	Phosphoserine phosphatase RsbU, N-terminal domain	automated matches	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
D	d2j6yd_	All alpha proteins	KaiA/RbsU domain	KaiA/RbsU domain	Phosphoserine phosphatase RsbU, N-terminal domain	automated matches	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
E	d2j6ye_	All alpha proteins	KaiA/RbsU domain	KaiA/RbsU domain	Phosphoserine phosphatase RsbU, N-terminal domain	automated matches	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	KaiA/RbsU domain	8041664	3000938	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	KaiA/RbsU domain	8041664	3000938	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	KaiA/RbsU domain	8041664	3000938	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	KaiA/RbsU domain	8041664	3000938	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	KaiA/RbsU domain	8041664	3000938	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF08673	e2j6yA1	A: alpha arrays	X: KaiA/RbsU domain-like	H: KaiA/RbsU domain (From Topology)	T: KaiA/RbsU domain	F: PF08673	ECOD (1.6)
B	PF08673	e2j6yB1	A: alpha arrays	X: KaiA/RbsU domain-like	H: KaiA/RbsU domain (From Topology)	T: KaiA/RbsU domain	F: PF08673	ECOD (1.6)
C	PF08673	e2j6yC1	A: alpha arrays	X: KaiA/RbsU domain-like	H: KaiA/RbsU domain (From Topology)	T: KaiA/RbsU domain	F: PF08673	ECOD (1.6)
D	PF08673	e2j6yD1	A: alpha arrays	X: KaiA/RbsU domain-like	H: KaiA/RbsU domain (From Topology)	T: KaiA/RbsU domain	F: PF08673	ECOD (1.6)
E	PF08673	e2j6yE1	A: alpha arrays	X: KaiA/RbsU domain-like	H: KaiA/RbsU domain (From Topology)	T: KaiA/RbsU domain	F: PF08673	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.1240.30	Mainly Alpha	Orthogonal Bundle	Methyltransferase, Methionine Synthase (B12-binding Domains)	Chain A, domain 1	CATH (4.3.0)
B	1.10.1240.30	Mainly Alpha	Orthogonal Bundle	Methyltransferase, Methionine Synthase (B12-binding Domains)	Chain A, domain 1	CATH (4.3.0)
C	1.10.1240.30	Mainly Alpha	Orthogonal Bundle	Methyltransferase, Methionine Synthase (B12-binding Domains)	Chain A, domain 1	CATH (4.3.0)
D	1.10.1240.30	Mainly Alpha	Orthogonal Bundle	Methyltransferase, Methionine Synthase (B12-binding Domains)	Chain A, domain 1	CATH (4.3.0)
E	1.10.1240.30	Mainly Alpha	Orthogonal Bundle	Methyltransferase, Methionine Synthase (B12-binding Domains)	Chain A, domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E	PF08673	Phosphoserine phosphatase RsbU, N-terminal domain (RsbU_N)	Phosphoserine phosphatase RsbU, N-terminal domain	RsbU is a phosphoserine phosphatase which acts as a positive regulator of the general stress-response factor of gram positive organisms, sigma-B. The phosphatase activity of RsbU is stimulated by association with the RsbT kinase. Deletions in the N ...	RsbU is a phosphoserine phosphatase which acts as a positive regulator of the general stress-response factor of gram positive organisms, sigma-B. The phosphatase activity of RsbU is stimulated by association with the RsbT kinase. Deletions in the N terminal domain are deleterious to the activity of RsbU [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E	PHOSPHOSERINE PHOSPHATASE RSBU	phosphoric ester hydrolase activity hydrolase activity, acting on ester bonds phosphatase activity hydrolase activity L-phosphoserine phosphatase activity catalytic activity phosphoprotein phosphatase activity catalytic activity, acting on a protein	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E	IPR036457	PPM-type phosphatase-like domain superfamily	Homologous Superfamily
A, B, C, D, E	IPR014787	Phosphoserine phosphatase RsbU, N-terminal	Domain
A, B, C, D, E	IPR017944	KaiA/RbsU helical domain superfamily	Homologous Superfamily
A, B, C, D, E	IPR001932	PPM-type phosphatase-like domain	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.