2IY4

X-ray structure of Dps from Listeria monocytogenes

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2iy4a_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Bd2iy4b_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Cd2iy4c_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Dd2iy4d_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Ed2iy4e_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Fd2iy4f_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Gd2iy4g_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Hd2iy4h_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Id2iy4i_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Jd2iy4j_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Kd2iy4k_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Ld2iy4l_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Md2iy4m_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Nd2iy4n_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Od2iy4o_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Pd2iy4p_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Qd2iy4q_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Rd2iy4r_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Sd2iy4s_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Td2iy4t_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Ud2iy4u_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
Vd2iy4v_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
W [auth X]d2iy4x_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)
X [auth Y]d2iy4y_ All alpha proteins Ferritin-like Ferritin-like Ferritin automated matches (Listeria monocytogenes ) [TaxId: 1639 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00210e2iy4A1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
BPF00210e2iy4B1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
CPF00210e2iy4C1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
DPF00210e2iy4D1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
EPF00210e2iy4E1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
FPF00210e2iy4F1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
GPF00210e2iy4G1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
HPF00210e2iy4H1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
IPF00210e2iy4I1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
JPF00210e2iy4J1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
KPF00210e2iy4K1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
LPF00210e2iy4L1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
MPF00210e2iy4M1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
NPF00210e2iy4N1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
OPF00210e2iy4O1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
PPF00210e2iy4P1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
QPF00210e2iy4Q1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
RPF00210e2iy4R1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
SPF00210e2iy4S1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
TPF00210e2iy4T1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
UPF00210e2iy4U1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
VPF00210e2iy4V1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
W [auth X]PF00210e2iy4X1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
X [auth Y]PF00210e2iy4Y1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
B1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
C1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
D1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
E1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
F1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
G1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
H1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
I1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
J1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
K1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
L1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
M1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
N1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
O1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
P1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
Q1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
R1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
S1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
T1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
U1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
V1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
W [auth X]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
X [auth Y]1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B,
C,
D,
E,
PF00210Ferritin-like domain (Ferritin)Ferritin-like domainThis family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B,
C,
D,
E,
NON-HEME IRON-CONTAINING FERRITIN

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
B,
C,
D,
E,
IPR012347Ferritin-likeHomologous Superfamily
A,
B,
C,
D,
E,
IPR009078Ferritin-like superfamilyHomologous Superfamily
A,
B,
C,
D,
E,
IPR002177DNA-binding protein DpsFamily
A,
B,
C,
D,
E,
IPR023188DNA-binding protein Dps, conserved siteConserved Site
A,
B,
C,
D,
E,
IPR008331Ferritin/DPS protein domainDomain