2GMG

Solution NMR Structure of protein PF0610 from Pyrococcus furiosus, Northeast Structural Genomics Consortium Target PfG3

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2gmga1	All alpha proteins	DNA/RNA-binding 3-helical bundle	'Winged helix' DNA-binding domain	PF0610-like	Hypothetical protein PF0610	(Pyrococcus furiosus DSM 3638 ) [TaxId: 186497 ],	SCOPe (2.08)
A	d2gmga2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Pyrococcus furiosus DSM 3638 ) [TaxId: 186497 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	PF0610-like	8003101	4000216	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Rubredoxin-like	8056281	3001257	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Winged helix DNA-binding domain	8003102	3000034	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	COG3357	e2gmgA2	A: alpha arrays	X: HTH	H: HTH	T: winged	F: COG3357	ECOD (1.6)
A	Zn-ribbon_8_2	e2gmgA3	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Zn-ribbon_8_2	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF21476	PF0610-like, N-terminal (PF0610-like_N)	PF0610-like, N-terminal	This domain is found in PF0610 from Pyrococcus furiosus. This protein has a Zn ribbon-embedded wHTH fold. This entry represents the N-terminal domain, which is composed of three helices [1].	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR038767	Transcriptional regulator containing an HTH domain fused to a Zn-ribbon, predicted	Family
A	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
A	IPR049159	PF0610-like, N-terminal	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.