2F2H
Structure of the YicI thiosugar Michaelis complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D | SCOP2B Superfamily | YicI C-terminal domain-like | 8040489 | 3000267 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | (Trans)glycosidases | 8040493 | 3000313 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Galactose mutarotase-like | 8040490 | 3000035 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Glycosyl hydrolase domain-like | 8040491 | 3001528 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Galactose mutarotase-like | 8040490 | 3000035 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Glycosyl hydrolase domain-like | 8040491 | 3001528 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | YicI C-terminal domain-like | 8040489 | 3000267 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | (Trans)glycosidases | 8040493 | 3000313 | SCOP2B (2022-06-29) |
A | SCOP2 Family | YicI N-terminal domain-like | 8028111 | 4003123 | SCOP2 (2022-06-29) |
A | SCOP2 Family | YicI post-catalytic domain-like | 8028112 | 4003233 | SCOP2 (2022-06-29) |
A | SCOP2 Family | YicI C-terminal domain-like | 8028110 | 4003108 | SCOP2 (2022-06-29) |
A | SCOP2 Family | YicI catalytic domain-like | 8028114 | 4003298 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Galactose mutarotase-like | 8040490 | 3000035 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Glycosyl hydrolase domain-like | 8040491 | 3001528 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | YicI C-terminal domain-like | 8040489 | 3000267 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | (Trans)glycosidases | 8040493 | 3000313 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | (Trans)glycosidases | 8040493 | 3000313 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Galactose mutarotase-like | 8040490 | 3000035 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Glycosyl hydrolase domain-like | 8040491 | 3001528 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | YicI C-terminal domain-like | 8040489 | 3000267 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | (Trans)glycosidases | 8040493 | 3000313 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Galactose mutarotase-like | 8040490 | 3000035 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Glycosyl hydrolase domain-like | 8040491 | 3001528 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | YicI C-terminal domain-like | 8040489 | 3000267 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Galactose mutarotase-like | 8040490 | 3000035 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Glycosyl hydrolase domain-like | 8040491 | 3001528 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | YicI C-terminal domain-like | 8040489 | 3000267 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | (Trans)glycosidases | 8040493 | 3000313 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | PF21365 | e2f2hD1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF21365 | ECOD (1.6) |
D | PF13802 | e2f2hD2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: PF13802 | ECOD (1.6) |
D | F_UNCLASSIFIED | e2f2hD3 | A: beta sandwiches | X: Putative glucosidase YicI, C-terminal domain (From Topology) | H: Putative glucosidase YicI, C-terminal domain (From Topology) | T: Putative glucosidase YicI, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
D | PF01055 | e2f2hD4 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01055 | ECOD (1.6) |
E | PF21365 | e2f2hE1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF21365 | ECOD (1.6) |
E | PF13802 | e2f2hE2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: PF13802 | ECOD (1.6) |
E | F_UNCLASSIFIED | e2f2hE3 | A: beta sandwiches | X: Putative glucosidase YicI, C-terminal domain (From Topology) | H: Putative glucosidase YicI, C-terminal domain (From Topology) | T: Putative glucosidase YicI, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
E | PF01055 | e2f2hE4 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01055 | ECOD (1.6) |
A | PF21365 | e2f2hA1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF21365 | ECOD (1.6) |
A | PF13802 | e2f2hA2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: PF13802 | ECOD (1.6) |
A | F_UNCLASSIFIED | e2f2hA3 | A: beta sandwiches | X: Putative glucosidase YicI, C-terminal domain (From Topology) | H: Putative glucosidase YicI, C-terminal domain (From Topology) | T: Putative glucosidase YicI, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF01055 | e2f2hA4 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01055 | ECOD (1.6) |
B | PF21365 | e2f2hB1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF21365 | ECOD (1.6) |
B | PF13802 | e2f2hB2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: PF13802 | ECOD (1.6) |
B | F_UNCLASSIFIED | e2f2hB3 | A: beta sandwiches | X: Putative glucosidase YicI, C-terminal domain (From Topology) | H: Putative glucosidase YicI, C-terminal domain (From Topology) | T: Putative glucosidase YicI, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF01055 | e2f2hB4 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01055 | ECOD (1.6) |
C | PF21365 | e2f2hC1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF21365 | ECOD (1.6) |
C | PF13802 | e2f2hC2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: PF13802 | ECOD (1.6) |
C | F_UNCLASSIFIED | e2f2hC3 | A: beta sandwiches | X: Putative glucosidase YicI, C-terminal domain (From Topology) | H: Putative glucosidase YicI, C-terminal domain (From Topology) | T: Putative glucosidase YicI, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
C | PF01055 | e2f2hC4 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01055 | ECOD (1.6) |
F | PF21365 | e2f2hF1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF21365 | ECOD (1.6) |
F | PF13802 | e2f2hF2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: PF13802 | ECOD (1.6) |
F | F_UNCLASSIFIED | e2f2hF3 | A: beta sandwiches | X: Putative glucosidase YicI, C-terminal domain (From Topology) | H: Putative glucosidase YicI, C-terminal domain (From Topology) | T: Putative glucosidase YicI, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
F | PF01055 | e2f2hF4 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01055 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21365 | Glycosyl hydrolase family 31 C-terminal domain (Glyco_hydro_31_3rd) | Glycosyl hydrolase family 31 C-terminal domain | Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases. This entry represents the 3rd beta sandwich domain. | Domain | |
PF13802 | Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain (Gal_mutarotas_2) | Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain | This entry represents the first of three common domains found in Glycosyl hydrolase 31 family proteins. It has a galactose mutarotase superfamily fold. | Domain | |
PF01055 | Glycosyl hydrolases family 31 TIM-barrel domain (Glyco_hydro_31_2nd) | Glycosyl hydrolases family 31 TIM-barrel domain | Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases. This entry corresponds to the second domain of family 31 enzymes and adopts a TIM-barrel fold. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Putative family 31 glucosidase yicI | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000322 | Glycoside hydrolase family 31, TIM barrel domain | Domain | |
IPR048395 | Glycosyl hydrolase family 31, C-terminal domain | Domain | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR013780 | Glycosyl hydrolase, all-beta | Homologous Superfamily | |
IPR025887 | Glycoside hydrolase family 31, N-terminal domain | Domain | |
IPR011013 | Galactose mutarotase-like domain superfamily | Homologous Superfamily |