2E9X
The crystal structure of human GINS core complex
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | PSF1 N-terminal domain-like | 8021511 | 4001441 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | GINS helical bundle-like | 8033891 | 3001594 | SCOP2 (2022-06-29) |
E | SCOP2B Superfamily | GINS helical bundle-like | 8033891 | 3001594 | SCOP2B (2022-06-29) |
B | SCOP2 Family | PSF2 C-terminal domain-like | 8021512 | 4001446 | SCOP2 (2022-06-29) |
B | SCOP2 Family | PSF2 N-terminal domain-like | 8021513 | 4001708 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | GINS helical bundle-like | 8033892 | 3001594 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | PriA/YqbF domain | 8033893 | 3000274 | SCOP2 (2022-06-29) |
F | SCOP2B Superfamily | PriA/YqbF domain | 8033893 | 3000274 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | GINS helical bundle-like | 8033892 | 3001594 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | GINS helical bundle-like | 8035318 | 3001594 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | PriA/YqbF domain | 8035319 | 3000274 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | PriA/YqbF domain | 8035319 | 3000274 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | GINS helical bundle-like | 8035318 | 3001594 | SCOP2B (2022-06-29) |
D | SCOP2 Family | SLD5 N-terminal domain-like | 8021516 | 4001452 | SCOP2 (2022-06-29) |
D | SCOP2 Family | SLD5 C-terminal domain-like | 8021517 | 4001713 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | GINS helical bundle-like | 8033896 | 3001594 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | PriA/YqbF domain | 8033897 | 3000274 | SCOP2 (2022-06-29) |
H | SCOP2B Superfamily | PriA/YqbF domain | 8033897 | 3000274 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | GINS helical bundle-like | 8033896 | 3001594 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Sld5_1 | e2e9xA1 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF1 N-terminal domain-like | F: Sld5_1 | ECOD (1.6) |
E | Sld5_1 | e2e9xE1 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF1 N-terminal domain-like | F: Sld5_1 | ECOD (1.6) |
B | Sld5 | e2e9xB1 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF2 C-terminal domain-like | F: Sld5 | ECOD (1.6) |
B | KOG4071 | e2e9xB2 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: KOG4071 | ECOD (1.6) |
F | Sld5 | e2e9xF1 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF2 C-terminal domain-like | F: Sld5 | ECOD (1.6) |
F | KOG4071 | e2e9xF2 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: KOG4071 | ECOD (1.6) |
C | Sld5 | e2e9xC1 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF2 C-terminal domain-like | F: Sld5 | ECOD (1.6) |
C | COG5138 | e2e9xC2 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: COG5138 | ECOD (1.6) |
G | Sld5 | e2e9xG1 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF2 C-terminal domain-like | F: Sld5 | ECOD (1.6) |
G | COG5138 | e2e9xG2 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: COG5138 | ECOD (1.6) |
D | Sld5_2 | e2e9xD1 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF1 N-terminal domain-like | F: Sld5_2 | ECOD (1.6) |
D | SLD5_C | e2e9xD2 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: SLD5_C | ECOD (1.6) |
H | Sld5_2 | e2e9xH1 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF1 N-terminal domain-like | F: Sld5_2 | ECOD (1.6) |
H | SLD5_C | e2e9xH2 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: SLD5_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05916 | GINS complex protein (Sld5) | GINS complex protein | - | Family | |
PF05916 | GINS complex protein (Sld5) | GINS complex protein | - | Family | |
PF05916 | GINS complex protein (Sld5) | GINS complex protein | - | Family | |
PF05916 | GINS complex protein (Sld5) | GINS complex protein | - | Family | |
PF16922 | DNA replication complex GINS protein SLD5 C-terminus (SLD5_C) | DNA replication complex GINS protein SLD5 C-terminus | The C-terminal domain of DNA replication complex GINS protein SLD5 is important in the assembly of the GINS complex, a complex which is involved in initiation of DNA replication and progression of DNA replication forks [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR021151 | GINS subunit, domain A | Domain | |
IPR005339 | GINS complex, subunit Psf1 | Family | |
IPR036224 | GINS, helical bundle-like domain superfamily | Homologous Superfamily | |
IPR007257 | DNA replication complex GINS protein Psf2 | Family | |
IPR021151 | GINS subunit, domain A | Domain | |
IPR036224 | GINS, helical bundle-like domain superfamily | Homologous Superfamily | |
IPR021151 | GINS subunit, domain A | Domain | |
IPR010492 | GINS complex, subunit Psf3 | Family | |
IPR038437 | GINS complex, subunit Psf3 superfamily | Homologous Superfamily | |
IPR036224 | GINS, helical bundle-like domain superfamily | Homologous Superfamily | |
IPR008591 | GINS complex subunit Sld5 | Family | |
IPR038749 | GINS complex protein Sld5, alpha-helical domain | Domain | |
IPR036224 | GINS, helical bundle-like domain superfamily | Homologous Superfamily | |
IPR021151 | GINS subunit, domain A | Domain | |
IPR031633 | DNA replication complex GINS protein SLD5, C-terminal | Domain |