2AKL
Solution structure for phn-A like protein PA0128 from Pseudomonas aeruginosa
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2akla1 | All beta proteins | SH3-like barrel | Prokaryotic SH3-related domain | PhnA-like | Hypothetical protein PA0128, C-terminal domain | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
A | d2akla2 | Small proteins | Rubredoxin-like | Zinc beta-ribbon | PhnA zinc-binding domain | Hypothetical protein PA0128, N-terminal domain | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
A | d2akla4 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
A | d2akla3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | PhnA zinc-binding domain | 8024753 | 4000509 | SCOP2 (2022-06-29) |
A | SCOP2 Family | PhnA-like | 8024752 | 4001707 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Zinc beta-ribbon | 8037132 | 3001238 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Prokaryotic SH3-related domain | 8037131 | 3001455 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF03831 | e2aklA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF03831 | ECOD (1.6) |
A | PF08274 | e2aklA2 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: PF08274 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.20.25.10 | Mainly Beta | Single Sheet | N-terminal domain of TfIIb | CATH (4.3.0) | |
A | 2.30.30.40 | Mainly Beta | Roll | SH3 type barrels. | SH3 Domains | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08274 | PhnA Zinc-Ribbon (YjdM_Zn_Ribbon) | PhnA Zinc-Ribbon | - | Domain | |
PF03831 | PhnA domain (YjdM) | PhnA domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
phnA-like protein pa0128 | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004624 | Protein YjdM | Family | |
IPR013988 | Protein YjdM, C-terminal | Domain | |
IPR013987 | Protein YjdM, N-terminal | Domain |