1XEQ
Crystal tructure of RNA binding domain of influenza B virus non-structural protein
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1xeqa1 | All alpha proteins | S15/NS1 RNA-binding domain | S15/NS1 RNA-binding domain | N-terminal, RNA-binding domain of nonstructural protein NS1 | N-terminal, RNA-binding domain of nonstructural protein NS1 | (Influenza B virus (B/Lee/1940) ) [TaxId: 518987 ], | SCOPe (2.08) |
B | d1xeqb_ | All alpha proteins | S15/NS1 RNA-binding domain | S15/NS1 RNA-binding domain | N-terminal, RNA-binding domain of nonstructural protein NS1 | N-terminal, RNA-binding domain of nonstructural protein NS1 | (Influenza B virus (B/Lee/1940) ) [TaxId: 518987 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | N-terminal RNA-binding domain of nonstructural protein NS1 | 8021328 | 4000764 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | S15/NS1 RNA-binding domain | 8033708 | 3001284 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | S15/NS1 RNA-binding domain | 8033708 | 3001284 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02942 | e1xeqA1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: PF02942 | ECOD (1.6) |
B | PF02942 | e1xeqB2 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: PF02942 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.287.10 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | S15/NS1, RNA-binding | CATH (4.3.0) |
B | 1.10.287.10 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | S15/NS1, RNA-binding | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02942 | Influenza B non-structural protein (NS1) (Flu_B_NS1) | Influenza B non-structural protein (NS1) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009068 | uS15/NS1, RNA-binding domain superfamily | Homologous Superfamily | |
IPR004208 | Influenza non-structural protein (NS1) | Family |