1X2I
Crystal Structure Of Archaeal Xpf/Mus81 Homolog, Hef From Pyrococcus Furiosus, Helix-hairpin-helix Domain
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1x2ia1 | All alpha proteins | SAM domain-like | RuvA domain 2-like | Hef domain-like | ATP-dependent RNA helicase PF2015 | (Pyrococcus furiosus ) [TaxId: 2261 ], | SCOPe (2.08) |
B | d1x2ib_ | All alpha proteins | SAM domain-like | RuvA domain 2-like | Hef domain-like | ATP-dependent RNA helicase PF2015 | (Pyrococcus furiosus ) [TaxId: 2261 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Hef domain-like | 8021183 | 4001374 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Helix-hairpin-helix tandem | 8033563 | 3000163 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Helix-hairpin-helix tandem | 8033563 | 3000163 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF12826 | e1x2iA1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: PF12826 | ECOD (1.6) |
B | PF12826 | e1x2iB1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: PF12826 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.150.20 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
B | 1.10.150.20 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12826 | Helix-hairpin-helix motif (HHH_2) | Helix-hairpin-helix motif | - | Motif |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR041663 | DisA/LigA, helix-hairpin-helix motif | Domain | |
IPR011335 | Restriction endonuclease type II-like | Homologous Superfamily | |
IPR001650 | Helicase, C-terminal domain-like | Domain | |
IPR014001 | Helicase superfamily 1/2, ATP-binding domain | Domain | |
IPR041755 | Archaeal Hef helicase/nuclease, insert domain | Domain | |
IPR010994 | RuvA domain 2-like | Homologous Superfamily | |
IPR006166 | ERCC4 domain | Domain | |
IPR003583 | Helix-hairpin-helix DNA-binding motif, class 1 | Domain | |
IPR011545 | DEAD/DEAH box helicase domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |