1T8U

Crystal Structure of human 3-O-Sulfotransferase-3 with bound PAP and tetrasaccharide substrate

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Structure Motif: Primary M-CSA Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1t8ua1	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	PAPS sulfotransferase	Heparan sulfate glucosamine 3-O-sulfotransferase 3	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d1t8ua2	Artifacts	Tags	Tags	Tags	N-terminal Tags	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
B	d1t8ub1	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	PAPS sulfotransferase	Heparan sulfate glucosamine 3-O-sulfotransferase 3	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
B	d1t8ub2	Artifacts	Tags	Tags	Tags	N-terminal Tags	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	P-loop nucleotide/nucleoside kinase-like	8054277	3002021	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	P-loop nucleotide/nucleoside kinase-like	8054277	3002021	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Sulfotransfer_1	e1t8uA1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Sulfotransfer_1	ECOD (1.6)
B	Sulfotransfer_1	e1t8uB1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Sulfotransfer_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
B	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00685	Sulfotransferase domain (Sulfotransfer_1)	Sulfotransferase domain	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3A1	transferase activity, transferring sulphur-containing groups sulfotransferase activity transferase activity catalytic activity heparan sulfate sulfotransferase activity [heparan sulfate]-glucosamine 3-sulfotransferase 3 activity [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity	proteoglycan biosynthetic process heparan sulfate proteoglycan biosynthetic process cellular biosynthetic process organonitrogen compound biosynthetic process carbohydrate derivative metabolic process organic substance metabolic process organic substance biosynthetic process sulfur compound metabolic process protein metabolic process heparan sulfate proteoglycan biosynthetic process, enzymatic modification carbohydrate derivative biosynthetic process organonitrogen compound metabolic process heparan sulfate proteoglycan metabolic process cellular metabolic process proteoglycan biosynthetic process heparan sulfate proteoglycan biosynthetic process cellular biosynthetic process organonitrogen compound biosynthetic process carbohydrate derivative metabolic process organic substance metabolic process organic substance biosynthetic process sulfur compound metabolic process protein metabolic process heparan sulfate proteoglycan biosynthetic process, enzymatic modification carbohydrate derivative biosynthetic process organonitrogen compound metabolic process heparan sulfate proteoglycan metabolic process cellular metabolic process glycoprotein biosynthetic process primary metabolic process glycoprotein metabolic process macromolecule biosynthetic process sulfur compound biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process proteoglycan metabolic process glycosaminoglycan metabolic process aminoglycan metabolic process aminoglycan biosynthetic process glycosaminoglycan biosynthetic process multicellular organismal process mesonephric epithelium development kidney epithelium development nephron morphogenesis branching morphogenesis of an epithelial tube nephron tubule morphogenesis nephron epithelium morphogenesis nephron tubule development renal system development multicellular organism development ureteric bud morphogenesis tube morphogenesis branching involved in ureteric bud morphogenesis anatomical structure development renal tubule development animal organ morphogenesis epithelial tube morphogenesis nephron development system development nephron epithelium development developmental process ureteric bud development epithelium development tube development mesonephros development animal organ development morphogenesis of an epithelium tissue development tissue morphogenesis anatomical structure morphogenesis kidney morphogenesis morphogenesis of a branching structure mesonephric tubule morphogenesis kidney development mesonephric tubule development renal tubule morphogenesis morphogenesis of a branching epithelium	membrane cellular anatomical entity membrane-bounded organelle Golgi membrane intracellular anatomical structure Golgi apparatus intracellular membrane-bounded organelle endomembrane system intracellular organelle bounding membrane of organelle organelle cytoplasm organelle membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR037359	Heparan sulfate sulfotransferase	Family
A, B	IPR000863	Sulfotransferase domain	Domain
A, B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q9Y663	adenoma cutaneous lupus erythematosus malignant ependymoma malignant pancreatic neoplasm psoriasis adrenal cortex carcinoma cystic fibrosis malignant glioma non-small cell lung carcinoma subependymal giant cell astrocytoma atopic eczema glioblastoma malignant mesothelioma osteosarcoma

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

Chains	Enzyme Name	Description	Catalytic Residues
A	heparan sulfate glucosamine 3-O-sulfotransferase M-CSA #999	3-O-sulfotransferase (3-OST) is one of the enzymes involved in the biosynthesis of heparan sulfate by catalyzing the transfer of a sulfate group from 3'-phosphoadenosine-5'-phosphosulfate to glucosamine units of heparan sulfate. Heparan sulfates are polysaccharides with variable patterns of sulfation and acetylation that serve as entry receptors for herpes simplex virus type 1 (HSV-1). Therefore, this enzyme might be a target for drugs since its inhibition may lead to the blockage of HSV-1 viral infections.	Defined by 6 residues: LYS:A-28 [auth A-162]GLU:A-50 [auth A-184]HIS:A-52 [auth A-186]ASP:A-55 [auth A-189]LYS:A-81 [auth A-215]LYS:A-234 [auth A-368] \| Explore in 3D: M-CSA Motif Definition Search M-CSA Motif

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.