1PMH

Crystal structure of Caldicellulosiruptor saccharolyticus CBM27-1 in complex with mannohexaose

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A [auth X]	d1pmhx_	All beta proteins	Galactose-binding domain-like	Galactose-binding domain-like	Family 27 carbohydrate binding module, CBM27	Beta-1,4-mannanase ManA	(Caldicellulosiruptor saccharolyticus ) [TaxId: 44001 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth X]	SCOP2 Family	family 27 carbohydrate binding module cbm27	8025808	4003903	SCOP2 (2022-06-29)
A [auth X]	SCOP2 Superfamily	galactose-binding domain-like	8038187	3000087	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth X]	PF11721	e1pmhX1	A: beta sandwiches	X: jelly-roll	H: Galactose-binding domain-like (From Topology)	T: Galactose-binding domain-like	F: PF11721	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A [auth X]	2.60.120.260	Mainly Beta	Sandwich	Jelly Rolls	Galactose-binding domain-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth X]	PF09212	Carbohydrate binding module 27 (CBM27)	Carbohydrate binding module 27	Members of this family are carbohydrate binding modules that bind to beta-1, 4-manno-oligosaccharides, carob galactomannan, and konjac glucomannan, but not to cellulose (insoluble and soluble) or soluble birchwood xylan. They adopt a beta sandwich st ...	Members of this family are carbohydrate binding modules that bind to beta-1, 4-manno-oligosaccharides, carob galactomannan, and konjac glucomannan, but not to cellulose (insoluble and soluble) or soluble birchwood xylan. They adopt a beta sandwich structure comprising 13 beta strands with a single, small alpha-helix and a single metal atom [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth X]	beta-1,4-mannanase	binding carbohydrate binding mannan endo-1,4-beta-mannosidase activity hydrolase activity, acting on glycosyl bonds beta-mannosidase activity hydrolase activity, hydrolyzing O-glycosyl compounds mannosidase activity hydrolase activity catalytic activity cation binding ion binding metal ion binding small molecule binding	carbohydrate metabolic process polysaccharide metabolic process organic substance metabolic process substituted mannan metabolic process metabolic process primary metabolic process macromolecule metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth X]	IPR005084	Carbohydrate binding module family 6	Domain
A [auth X]	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A [auth X]	IPR022790	Glycosyl hydrolase family 26 domain	Domain
A [auth X]	IPR015295	Carbohydrate binding module 27	Domain
A [auth X]	IPR008979	Galactose-binding-like domain superfamily	Homologous Superfamily
A [auth X]	IPR000805	Glycoside hydrolase family 26	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.