1PDC
REFINED SOLUTION STRUCTURE AND LIGAND-BINDING PROPERTIES OF PDC-109 DOMAIN B. A COLLAGEN-BINDING TYPE II DOMAIN
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1pdca_ | Small proteins | Kringle-like | Kringle-like | Fibronectin type II module | PDC-109, collagen-binding type II domain | cattle (Bos taurus ) [TaxId: 9913 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Kringle-like | 8039436 | 3000761 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.10.10.10 | Mainly Beta | Ribbon | Seminal Fluid Protein PDC-109 (Domain B) | Fibronectin, type II, collagen-binding | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00040 | Fibronectin type II domain (fn2) | Fibronectin type II domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013806 | Kringle-like fold | Homologous Superfamily | |
IPR016356 | Seminal plasma protein, PDC-109-like | Family | |
IPR036943 | Fibronectin type II domain superfamily | Homologous Superfamily | |
IPR000562 | Fibronectin type II domain | Domain |