1P23

STRUCTURE OF THE DIMERIZED CYTOPLASMIC DOMAIN OF P23 IN SOLUTION, NMR, 10 STRUCTURES

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1p23a_	Peptides	Transmembrane helical fragments	Transmembrane helical fragments	Transmembrane helical fragments	Cytoplasmic domain of p23	( ) [TaxId: ], (Oryctolagus cuniculus ) [TaxId: 9986 ],	SCOPe (2.08)
B	d1p23b_	Peptides	Transmembrane helical fragments	Transmembrane helical fragments	Transmembrane helical fragments	Cytoplasmic domain of p23	( ) [TaxId: ], (Oryctolagus cuniculus ) [TaxId: 9986 ],	SCOPe (2.08)
C	d1p23c_	Peptides	Transmembrane helical fragments	Transmembrane helical fragments	Transmembrane helical fragments	Cytoplasmic domain of p23	( ) [TaxId: ], (Oryctolagus cuniculus ) [TaxId: 9986 ],	SCOPe (2.08)
D	d1p23d_	Peptides	Transmembrane helical fragments	Transmembrane helical fragments	Transmembrane helical fragments	Cytoplasmic domain of p23	( ) [TaxId: ], (Oryctolagus cuniculus ) [TaxId: 9986 ],	SCOPe (2.08)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF01105	emp24/gp25L/p24 family/GOLD (EMP24_GP25L)	emp24/gp25L/p24 family/GOLD	Members of this family are implicated in bringing cargo forward from the ER and binding to coat proteins by their cytoplasmic domains. This domain corresponds closely to the beta-strand rich GOLD domain described in [2]. The GOLD domain is always ...	Members of this family are implicated in bringing cargo forward from the ER and binding to coat proteins by their cytoplasmic domains. This domain corresponds closely to the beta-strand rich GOLD domain described in [2]. The GOLD domain is always found combined with lipid- or membrane-association domains [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	TRANSMEMBRANE PROTEIN TMP21 PRECURSOR	macromolecule transmembrane transporter activity protein transporter activity protein transmembrane transporter activity transporter activity transmembrane transporter activity	multicellular organismal process regulation of cellular process interleukin-1 production cellular biosynthetic process positive regulation of biological process positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process organic substance metabolic process positive regulation of biosynthetic process regulation of cytokine production organic substance biosynthetic process cytokine production positive regulation of interleukin-1 production multicellular organismal process regulation of cellular process interleukin-1 production cellular biosynthetic process positive regulation of biological process positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process organic substance metabolic process positive regulation of biosynthetic process regulation of cytokine production organic substance biosynthetic process cytokine production positive regulation of interleukin-1 production regulation of multicellular organismal process positive regulation of macromolecule metabolic process positive regulation of cellular process regulation of biosynthetic process regulation of biological process regulation of interleukin-1 production cellular metabolic process biological regulation regulation of cellular metabolic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process positive regulation of gene expression positive regulation of multicellular organismal process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process positive regulation of cytokine production regulation of metabolic process positive regulation of cellular biosynthetic process localization transport retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum establishment of localization Golgi vesicle transport vesicle-mediated transport protein localization regulation of localization establishment of protein localization cellular localization nitrogen compound transport regulation of protein localization positive regulation of establishment of protein localization positive regulation of secretion by cell protein localization to extracellular region positive regulation of protein transport regulation of secretion by cell secretion by cell positive regulation of secretion cellular macromolecule localization regulation of transport secretion organic substance transport regulation of establishment of protein localization establishment of protein localization to extracellular region export from cell regulation of protein transport protein secretion positive regulation of protein secretion regulation of protein secretion regulation of secretion positive regulation of transport protein transport regulation of cellular localization macromolecule localization positive regulation of protein localization amyloid precursor protein catabolic process regulation of amide metabolic process organonitrogen compound metabolic process regulation of amyloid-beta formation regulation of protein metabolic process regulation of amyloid precursor protein catabolic process primary metabolic process regulation of primary metabolic process amyloid-beta metabolic process protein metabolic process amide metabolic process amyloid precursor protein metabolic process amyloid-beta formation cytosol to ERGIC protein transport vesicle localization establishment of organelle localization membrane organization vesicle budding from membrane establishment of vesicle localization vesicle targeting, to, from or within Golgi vesicle targeting COPI-coated vesicle budding cellular component organization vesicle organization organelle organization organelle localization establishment of localization in cell cellular component organization or biogenesis protein localization to Golgi apparatus protein localization to organelle protein localization to ERGIC	membrane-bounded organelle intracellular anatomical structure transport vesicle intracellular vesicle cellular anatomical entity intracellular membrane-bounded organelle endomembrane system intracellular organelle trans-Golgi network transport vesicle cytoplasmic vesicle organelle clathrin-coated vesicle coated vesicle cytoplasm membrane-bounded organelle intracellular anatomical structure transport vesicle intracellular vesicle cellular anatomical entity intracellular membrane-bounded organelle endomembrane system intracellular organelle trans-Golgi network transport vesicle cytoplasmic vesicle organelle clathrin-coated vesicle coated vesicle cytoplasm Golgi-associated vesicle vesicle COPI-coated vesicle membrane cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane secretory granule secretory vesicle organelle membrane secretory granule membrane pigment granule melanosome Golgi membrane Golgi apparatus endoplasmic reticulum-Golgi intermediate compartment membrane endoplasmic reticulum-Golgi intermediate compartment cell periphery plasma membrane protein-containing complex catalytic complex plasma membrane protein complex membrane protein complex gamma-secretase complex transport vesicle membrane organelle subcompartment endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum endoplasmic reticulum membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR009038	GOLD domain	Domain
A, B, C, D	IPR015720	Transmembrane emp24 domain-containing protein	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.