Annotations: 1JZD

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d1jzdc_	All beta proteins	Immunoglobulin-like beta-sandwich	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
A	d1jzda1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	DsbC/DsbG C-terminal domain-like	Disulfide bond isomerase, DsbC, C-terminal domain	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
A	d1jzda2	Alpha and beta proteins (a+b)	Cystatin-like	DsbC/DsbG N-terminal domain-like	DsbC/DsbG N-terminal domain-like	Disulfide bond isomerase, DsbC, N-terminal domain	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
A	d1jzda3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
B	d1jzdb1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	DsbC/DsbG C-terminal domain-like	Disulfide bond isomerase, DsbC, C-terminal domain	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
B	d1jzdb2	Alpha and beta proteins (a+b)	Cystatin-like	DsbC/DsbG N-terminal domain-like	DsbC/DsbG N-terminal domain-like	Disulfide bond isomerase, DsbC, N-terminal domain	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	Thiol:disulfide interchange protein DsbD N-terminal domain (DsbD-alpha)	8055353	3002068	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Thioredoxin-like	8044391	3000031	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	DsbC/DsbG N-terminal domain-like	8034665	3000466	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Thioredoxin-like	8044391	3000031	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	DsbC/DsbG N-terminal domain-like	8034665	3000466	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	PF11412	e1jzdC1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF11412	ECOD (1.6)
A	PF10411	e1jzdA1	A: a+b two layers	X: Cystatin-like	H: DsbC/DsbG N-terminal domain-like (From Topology)	T: DsbC/DsbG N-terminal domain-like	F: PF10411	ECOD (1.6)
A	PF13098	e1jzdA2	A: a+b three layers	X: Thioredoxin-like	H: Thioredoxin-like (From Topology)	T: Thioredoxin-like	F: PF13098	ECOD (1.6)
B	PF10411	e1jzdB1	A: a+b two layers	X: Cystatin-like	H: DsbC/DsbG N-terminal domain-like (From Topology)	T: DsbC/DsbG N-terminal domain-like	F: PF10411	ECOD (1.6)
B	PF13098	e1jzdB2	A: a+b three layers	X: Thioredoxin-like	H: Thioredoxin-like (From Topology)	T: Thioredoxin-like	F: PF13098	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	2.60.40.1250	Mainly Beta	Sandwich	Immunoglobulin-like	Thiol:disulfide interchange protein DsbD, N-terminal domain	CATH (4.3.0)
A	3.10.450.70	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
A	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
B	3.10.450.70	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
B	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C	PF11412	Thiol:disulfide interchange protein DsbD, N-terminal (DsbD_N)	Thiol:disulfide interchange protein DsbD, N-terminal	This entry represents the N-terminal domain of DsbD, a transmembrane electron transporter [1-3]. DsbD binds to a DsbC dimer and selectively activates it using electrons from the cytoplasm. The N-terminal domain of DsbD (DsbDN) is capable of forming d ...	This entry represents the N-terminal domain of DsbD, a transmembrane electron transporter [1-3]. DsbD binds to a DsbC dimer and selectively activates it using electrons from the cytoplasm. The N-terminal domain of DsbD (DsbDN) is capable of forming disulfides with oxidized DsbC, DsbE, or DsbG as well as with reduced DsbD [1-3].	Domain
A, B	PF10411	Disulfide bond isomerase protein N-terminus (DsbC_N)	Disulfide bond isomerase protein N-terminus	This is the N-terminal domain of the disulfide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of t ...	This is the N-terminal domain of the disulfide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation [1]. DsbC is required for disulfide bond formation and functions as a disulfide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity [2].	Domain
A, B	PF13098	Thioredoxin-like domain (Thioredoxin_2)	Thioredoxin-like domain	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C	thiol:disulfide interchange protein dsbd	oxidoreductase activity, acting on a sulfur group of donors disulfide oxidoreductase activity oxidoreductase activity catalytic activity, acting on a protein protein-disulfide reductase activity catalytic activity protein-disulfide reductase (NAD(P)H) activity oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor electron transfer activity	response to copper ion response to stimulus response to metal ion response to chemical response to inorganic substance cell redox homeostasis cellular homeostasis homeostatic process cytochrome complex assembly cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly response to copper ion response to stimulus response to metal ion response to chemical response to inorganic substance cell redox homeostasis cellular homeostasis homeostatic process cytochrome complex assembly cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular process cellular component organization or biogenesis	cell periphery plasma membrane membrane cellular anatomical entity
A, B	thiol:disulfide interchange protein dsbc	identical protein binding protein binding binding protein homodimerization activity protein dimerization activity oxidoreductase activity, acting on a sulfur group of donors disulfide oxidoreductase activity oxidoreductase activity catalytic activity, acting on a protein protein-disulfide reductase activity catalytic activity isomerase activity intramolecular oxidoreductase activity intramolecular oxidoreductase activity, transposing S-S bonds identical protein binding protein binding binding protein homodimerization activity protein dimerization activity oxidoreductase activity, acting on a sulfur group of donors disulfide oxidoreductase activity oxidoreductase activity catalytic activity, acting on a protein protein-disulfide reductase activity catalytic activity isomerase activity intramolecular oxidoreductase activity intramolecular oxidoreductase activity, transposing S-S bonds protein disulfide isomerase activity	response to copper ion response to stimulus response to metal ion response to chemical response to inorganic substance organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process primary metabolic process gene expression chaperone-mediated protein folding macromolecule biosynthetic process protein maturation organic substance metabolic process response to copper ion response to stimulus response to metal ion response to chemical response to inorganic substance organonitrogen compound metabolic process cellular biosynthetic process cellular metabolic process primary metabolic process gene expression chaperone-mediated protein folding macromolecule biosynthetic process protein maturation organic substance metabolic process protein folding biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	periplasmic space cellular anatomical entity outer membrane-bounded periplasmic space cell envelope

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C	IPR028250	Thiol:disulfide interchange protein DsbD, N-terminal domain	Domain
C	IPR013766	Thioredoxin domain	Domain
C	IPR003834	Cytochrome C biogenesis protein, transmembrane domain	Domain
C	IPR012336	Thioredoxin-like fold	Domain
C	IPR022910	Thiol:disulphide interchange protein DsbD	Family
C	IPR017937	Thioredoxin, conserved site	Conserved Site
C	IPR035671	DsbD gamma	Domain
C	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
C	IPR036929	Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily	Homologous Superfamily
A, B	IPR013766	Thioredoxin domain	Domain
A, B	IPR012336	Thioredoxin-like fold	Domain
A, B	IPR017937	Thioredoxin, conserved site	Conserved Site
A, B	IPR033954	Disulphide bond isomerase, DsbC/G	Family
A, B	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
A, B	IPR018950	Disulphide bond isomerase, DsbC/G, N-terminal	Domain
A, B	IPR009094	Disulphide bond isomerase DsbC/G, N-terminal domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.