1HMJ
SOLUTION STRUCTURE OF RNA POLYMERASE SUBUNIT H
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1hmja_ | Alpha and beta proteins (a+b) | RPB5-like RNA polymerase subunit | RPB5-like RNA polymerase subunit | RPB5 | RNA polymerase subunit RBP5 (RNA polymerase subunit H) | (Methanocaldococcus jannaschii ) [TaxId: 2190 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01191 | e1hmjA1 | A: a+b two layers | X: RPB5-like RNA polymerase subunit (From Topology) | H: RPB5-like RNA polymerase subunit (From Topology) | T: RPB5-like RNA polymerase subunit | F: PF01191 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01191 | RNA polymerase Rpb5, C-terminal domain (RNA_pol_Rpb5_C) | RNA polymerase Rpb5, C-terminal domain | The assembly domain of Rpb5 [1]. The archaeal equivalent to this domain is subunit H. Subunit H lacks the N-terminal domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR014381 | DNA-directed RNA polymerase subunit Rpo5/Rpb5 | Family | |
IPR035913 | RPB5-like RNA polymerase subunit superfamily | Homologous Superfamily | |
IPR000783 | RNA polymerase, subunit H/Rpb5 C-terminal | Domain | |
IPR020608 | RNA polymerase, subunit H/Rpb5, conserved site | Conserved Site |