Annotations: 1F2D

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1f2da1	Alpha and beta proteins (a/b)	Tryptophan synthase beta subunit-like PLP-dependent enzymes	Tryptophan synthase beta subunit-like PLP-dependent enzymes	Tryptophan synthase beta subunit-like PLP-dependent enzymes	1-aminocyclopropane-1-carboxylate deaminase	(Cyberlindnera saturnus ) [TaxId: 907340 ],	SCOPe (2.08)
A	d1f2da2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Cyberlindnera saturnus ) [TaxId: 907340 ],	SCOPe (2.08)
B	d1f2db1	Alpha and beta proteins (a/b)	Tryptophan synthase beta subunit-like PLP-dependent enzymes	Tryptophan synthase beta subunit-like PLP-dependent enzymes	Tryptophan synthase beta subunit-like PLP-dependent enzymes	1-aminocyclopropane-1-carboxylate deaminase	(Cyberlindnera saturnus ) [TaxId: 907340 ],	SCOPe (2.08)
B	d1f2db2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Cyberlindnera saturnus ) [TaxId: 907340 ],	SCOPe (2.08)
C	d1f2dc1	Alpha and beta proteins (a/b)	Tryptophan synthase beta subunit-like PLP-dependent enzymes	Tryptophan synthase beta subunit-like PLP-dependent enzymes	Tryptophan synthase beta subunit-like PLP-dependent enzymes	1-aminocyclopropane-1-carboxylate deaminase	(Cyberlindnera saturnus ) [TaxId: 907340 ],	SCOPe (2.08)
C	d1f2dc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Cyberlindnera saturnus ) [TaxId: 907340 ],	SCOPe (2.08)
D	d1f2dd1	Alpha and beta proteins (a/b)	Tryptophan synthase beta subunit-like PLP-dependent enzymes	Tryptophan synthase beta subunit-like PLP-dependent enzymes	Tryptophan synthase beta subunit-like PLP-dependent enzymes	1-aminocyclopropane-1-carboxylate deaminase	(Cyberlindnera saturnus ) [TaxId: 907340 ],	SCOPe (2.08)
D	d1f2dd2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Cyberlindnera saturnus ) [TaxId: 907340 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Tryptophan synthase beta subunit-like PLP-dependent enzymes	8020619	4000798	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Tryptophan synthase beta subunit-like PLP-dependent enzymes	8032999	3001427	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Tryptophan synthase beta subunit-like PLP-dependent enzymes	8032999	3001427	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Tryptophan synthase beta subunit-like PLP-dependent enzymes	8032999	3001427	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Tryptophan synthase beta subunit-like PLP-dependent enzymes	8032999	3001427	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00291	e1f2dA1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Tryptophan synthase beta subunit-like PLP-dependent enzymes (From Topology)	T: Tryptophan synthase beta subunit-like PLP-dependent enzymes	F: PF00291	ECOD (1.6)
B	PF00291	e1f2dB1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Tryptophan synthase beta subunit-like PLP-dependent enzymes (From Topology)	T: Tryptophan synthase beta subunit-like PLP-dependent enzymes	F: PF00291	ECOD (1.6)
C	PF00291	e1f2dC2	A: a/b three-layered sandwiches	X: Rossmann-like	H: Tryptophan synthase beta subunit-like PLP-dependent enzymes (From Topology)	T: Tryptophan synthase beta subunit-like PLP-dependent enzymes	F: PF00291	ECOD (1.6)
D	PF00291	e1f2dD1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Tryptophan synthase beta subunit-like PLP-dependent enzymes (From Topology)	T: Tryptophan synthase beta subunit-like PLP-dependent enzymes	F: PF00291	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.1100	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (4.3.0)
B	3.40.50.1100	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (4.3.0)
C	3.40.50.1100	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (4.3.0)
D	3.40.50.1100	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00291	Pyridoxal-phosphate dependent enzyme (PALP)	Pyridoxal-phosphate dependent enzyme	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE	1-aminocyclopropane-1-carboxylate deaminase activity hydrolase activity deaminase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds vitamin binding vitamin B6 binding pyridoxal phosphate binding ion binding binding organic cyclic compound binding anion binding heterocyclic compound binding small molecule binding	organonitrogen compound catabolic process amine metabolic process organonitrogen compound metabolic process organic substance metabolic process catabolic process metabolic process organic substance catabolic process amine catabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR027278	1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase	Family
A, B, C, D	IPR036052	Tryptophan synthase beta chain-like, PALP domain superfamily	Homologous Superfamily
A, B, C, D	IPR001926	Tryptophan synthase beta chain-like, PALP domain	Domain
A, B, C, D	IPR005965	1-aminocyclopropane-1-carboxylate deaminase	Family

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

Chains	Enzyme Name	Description	Catalytic Residues
A	1-aminocyclopropane-1-carboxylate deaminase M-CSA #545	1-aminocyclopropane-1-carboxylate (ACC) deaminase is a pyridoxal phosphate-dependent enzyme which catalyses a cyclopropane ring-opening reaction, the irreversible conversion of ACC to ammonia and alpha-ketobutyrate. In plants, the latter is a precursor of the ripening hormone ethylene. Some plant growth-promoting rhizobacteria can produce 1-aminocyclopropane-1-carboxylate deaminase to enhance plant growth. ACC deaminase is unique amongst PLP-dependent enzymes, since the ring cleavage catalysed by ACC deaminase cannot proceed through an α-carbanionic intermediate due to the lack of an abstractable alpha-hydrogen atom from the substrate ACC.	Defined by 3 residues: LYS:A-51TYR:A-269TYR:A-295 \| Explore in 3D: M-CSA Motif Definition Search M-CSA Motif EC: 4.1.99.4 (PDB Primary Data) Search M-CSA Motif + EC 4.1.99.4

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.