Annotations: 1D2Q

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1d2qa_	All beta proteins	TNF-like	TNF-like	TNF-like	Apoptosis-2 ligand, apo2l/TRAIL	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
B	d1d2qb_	All beta proteins	TNF-like	TNF-like	TNF-like	automated matches	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	TNF-like	8041237	3000061	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	TNF-like	8041237	3000061	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	TNF	e1d2qA1	A: beta sandwiches	X: jelly-roll	H: TNF-like (From Topology)	T: TNF-like	F: TNF	ECOD (1.6)
B	TNF	e1d2qB1	A: beta sandwiches	X: jelly-roll	H: TNF-like (From Topology)	T: TNF-like	F: TNF	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.120.40	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
B	2.60.120.40	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00229	TNF(Tumour Necrosis Factor) family (TNF)	TNF(Tumour Necrosis Factor) family	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	TNF-RELATED APOPTOSIS INDUCING LIGAND	protein binding binding signaling receptor binding molecular function activator activity molecular function regulator activity cytokine activity signaling receptor regulator activity receptor ligand activity signaling receptor activator activity TRAIL binding cation binding transition metal ion binding zinc ion binding ion binding protein binding binding signaling receptor binding molecular function activator activity molecular function regulator activity cytokine activity signaling receptor regulator activity receptor ligand activity signaling receptor activator activity TRAIL binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding cytokine receptor binding tumor necrosis factor receptor superfamily binding tumor necrosis factor receptor binding identical protein binding	developmental process multicellular organismal process gonad development reproductive system development reproductive process sex differentiation animal organ development developmental process involved in reproduction male gonad development male sex differentiation multicellular organism development development of primary male sexual characteristics development of primary sexual characteristics anatomical structure development reproductive structure development developmental process multicellular organismal process gonad development reproductive system development reproductive process sex differentiation animal organ development developmental process involved in reproduction male gonad development male sex differentiation multicellular organism development development of primary male sexual characteristics development of primary sexual characteristics anatomical structure development reproductive structure development system development cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction positive regulation of canonical NF-kappaB signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette signal transduction positive regulation of cellular process regulation of biological process regulation of signaling biological regulation positive regulation of intracellular signal transduction canonical NF-kappaB signal transduction regulation of response to stimulus regulation of cell communication regulation of canonical NF-kappaB signal transduction cellular process positive regulation of signaling immune response immune system process positive regulation of organelle organization regulation of cellular component organization positive regulation of cellular component organization apoptotic mitochondrial changes regulation of release of cytochrome c from mitochondria cellular component organization positive regulation of release of cytochrome c from mitochondria cellular component organization or biogenesis mitochondrion organization cell death regulation of organelle organization apoptotic signaling pathway release of cytochrome c from mitochondria organelle organization regulation of mitochondrion organization apoptotic process programmed cell death response to organic substance response to hormone response to chemical response to endogenous stimulus response to organonitrogen compound response to peptide hormone response to insulin response to oxygen-containing compound response to nitrogen compound positive regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death positive regulation of apoptotic process cell-cell signaling extrinsic apoptotic signaling pathway positive regulation of apoptotic signaling pathway cell surface receptor signaling pathway positive regulation of extrinsic apoptotic signaling pathway regulation of extrinsic apoptotic signaling pathway regulation of apoptotic signaling pathway regulation of catalytic activity positive regulation of protein metabolic process positive regulation of peptidase activity positive regulation of cysteine-type endopeptidase activity involved in apoptotic process regulation of primary metabolic process positive regulation of molecular function positive regulation of metabolic process regulation of cysteine-type endopeptidase activity involved in apoptotic process organic substance metabolic process regulation of proteolysis proteolysis regulation of endopeptidase activity positive regulation of macromolecule metabolic process protein metabolic process regulation of cysteine-type endopeptidase activity organonitrogen compound metabolic process regulation of protein metabolic process regulation of peptidase activity positive regulation of catalytic activity primary metabolic process regulation of macromolecule metabolic process regulation of molecular function positive regulation of hydrolase activity positive regulation of cysteine-type endopeptidase activity regulation of hydrolase activity positive regulation of endopeptidase activity positive regulation of proteolysis metabolic process macromolecule metabolic process regulation of metabolic process	extracellular region cellular anatomical entity extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle extracellular space vesicle extracellular membrane-bounded organelle cell periphery plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR008983	Tumour necrosis factor-like domain superfamily	Homologous Superfamily
A, B	IPR006052	Tumour necrosis factor domain	Domain
A, B	IPR021184	Tumour necrosis factor, conserved site	Conserved Site
A, B	IPR017355	Tumour necrosis factor ligand 10/11	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: P50591	malignant glioma glioblastoma malignant colon neoplasm renal cell carcinoma acute myeloid leukemia neuroblastoma prostate cancer colorectal cancer malignant pancreatic neoplasm Mammary Neoplasms, Experimental endometrial carcinoma mixed glioma influenza liver cancer chromophobe renal cell carcinoma malignant glioma glioblastoma malignant colon neoplasm renal cell carcinoma acute myeloid leukemia neuroblastoma prostate cancer colorectal cancer malignant pancreatic neoplasm Mammary Neoplasms, Experimental endometrial carcinoma mixed glioma influenza liver cancer chromophobe renal cell carcinoma collecting duct carcinoma ovarian cancer breast carcinoma sarcomatoid renal cell carcinoma giant cell glioblastoma hepatocellular carcinoma leukemia papillary renal cell carcinoma lung carcinoma pituitary cancer clear cell renal carcinoma renal carcinoma cystic fibrosis ulcerative colitis estrogen-receptor negative breast cancer adenoma oligodendroglioma atypical teratoid rhabdoid tumor kidney cancer pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia breast cancer lung adenocarcinoma plasma cell myeloma malignant mesothelioma colorectal carcinoma Crohn disease MALT lymphoma subependymal giant cell astrocytoma Duchenne muscular dystrophy multiple sclerosis Gaucher disease adrenal cortex carcinoma glioma benign colon neoplasm kidney neoplasm pancreatic intraductal papillary-mucinous carcinoma brain injury pancreatic neoplasm lung cancer pilocytic astrocytoma chronic obstructive pulmonary disease malignant ependymoma primitive neuroectodermal tumor colonic neoplasm psoriasis cutaneous lupus erythematosus tuberculosis endometrial cancer medulloblastoma endometriosis atopic eczema ovarian neoplasm juvenile dermatomyositis pancreatic intraductal papillary-mucinous neoplasm liver neoplasm cancer

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.