1BCO
BACTERIOPHAGE MU TRANSPOSASE CORE DOMAIN
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1bcoa1 | All beta proteins | mu transposase, C-terminal domain | mu transposase, C-terminal domain | mu transposase, C-terminal domain | mu transposase, C-terminal domain | (Muvirus mu ) [TaxId: 10677 ], | SCOPe (2.08) |
A | d1bcoa2 | Alpha and beta proteins (a/b) | Ribonuclease H-like motif | Ribonuclease H-like | mu transposase, core domain | mu transposase, core domain | (Muvirus mu ) [TaxId: 10677 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Mu transposase catalytic domain-like | 8003607 | 4000351 | SCOP2 (2022-06-29) |
A | SCOP2 Family | mu transposase C-terminal domain-like | 8003610 | 4000352 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Ribonuclease H-like | 8003608 | 3000143 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Mu transposase C-terminal domain-like | 8003611 | 3000144 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF09299 | e1bcoA1 | A: beta barrels | X: OB-fold | H: mu transposases-C (From Topology) | T: mu transposases-C | F: PF09299 | ECOD (1.6) |
A | PF02914 | e1bcoA2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF02914 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.420.10 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
A | 2.30.30.130 | Mainly Beta | Roll | SH3 type barrels. | Transposase, Mu, C-terminal | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02914 | Bacteriophage Mu transposase (DDE_2) | Bacteriophage Mu transposase | This transposase is essential for integration, replication-transposition and excision of Bacteriophage Mu DNA. The crystal structure of the core domain of Mu transposase, MuA, exhibits that the first of two subdomains contains the active site and, de ... | Domain | |
PF09299 | Mu transposase, C-terminal (Mu-transpos_C) | Mu transposase, C-terminal | Members of this family are found in various prokaryotic integrases and transposases. They adopt a beta-barrel structure with Greek-key topology [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036397 | Ribonuclease H superfamily | Homologous Superfamily | |
IPR009061 | Putative DNA-binding domain superfamily | Homologous Superfamily | |
IPR009004 | Transposase, Mu, C-terminal | Homologous Superfamily | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR009057 | Homeobox-like domain superfamily | Homologous Superfamily | |
IPR004189 | Bacteriophage Mu, transposase | Domain | |
IPR003314 | Mu-type HTH domain | Domain | |
IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily | |
IPR015126 | Mu DNA binding, I gamma subdomain | Domain | |
IPR015378 | Transposase-like, Mu, C-terminal | Domain |