AF_AFQ7LYW4F1

COMPUTED STRUCTURE MODEL OF HTH-TYPE SUGAR SENSING TRANSCRIPTIONAL REGULATOR TRMB

There are no experimental data to verify the accuracy of this computed structure model. See Model Confidence metrics below for all regions of the polypeptide chain.

• AlphaFold DB: AF-Q7LYW4-F1
• Released in AlphaFold DB:  2021-12-09
  Last Modified in AlphaFold DB: 2022-09-30
• Organism(s): Thermococcus litoralis DSM 5473
• UniProtKB: Q7LYW4

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Model Confidence 

• pLDDT (global): 94.61
• pLDDT (local):

Model Confidence 

•   Very high (pLDDT > 90)    
•   Confident (70 < pLDDT ≤ 90)    
•   Low (50 < pLDDT ≤ 70)    
•   Very low (pLDDT ≤ 50)    

Computed Structure Models provide per-residue confidence score (pLDDT) between 0 and 100. Some regions below 50 pLDDT may be unstructured in isolation.

Assembly  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Macromolecule Content 

• Total Structure Weight: 38.89 kDa 
• Atom Count: 2,744 
• Modeled Residue Count: 338 
• Deposited Residue Count: 338 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
HTH-type sugar sensing transcriptional regulator TrmB	A	338	Thermococcus litoralis DSM 5473	Mutation(s): 0  Gene Names: trmB
UniProt
Find proteins for Q7LYW4 (Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C)) Explore Q7LYW4  Go to UniProtKB:  Q7LYW4