AF_AFQ5JFR2F1

COMPUTED STRUCTURE MODEL OF PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT PDXT

There are no experimental data to verify the accuracy of this computed structure model. See Model Confidence metrics below for all regions of the polypeptide chain.

• AlphaFold DB: AF-Q5JFR2-F1
• Released in AlphaFold DB:  2021-12-09
  Last Modified in AlphaFold DB: 2022-09-30
• Organism(s): Thermococcus kodakarensis KOD1
• UniProtKB: Q5JFR2

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Model Confidence 

• pLDDT (global): 95.94
• pLDDT (local):

Model Confidence 

•   Very high (pLDDT > 90)    
•   Confident (70 < pLDDT ≤ 90)    
•   Low (50 < pLDDT ≤ 70)    
•   Very low (pLDDT ≤ 50)    

Computed Structure Models provide per-residue confidence score (pLDDT) between 0 and 100. Some regions below 50 pLDDT may be unstructured in isolation.

Assembly  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Macromolecule Content 

• Total Structure Weight: 21.82 kDa 
• Atom Count: 1,536 
• Modeled Residue Count: 197 
• Deposited Residue Count: 197 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Pyridoxal 5'-phosphate synthase subunit PdxT	A	197	Thermococcus kodakarensis KOD1	Mutation(s): 0  Gene Names: pdxT EC: 4.3.3.6 (UniProt), 3.5.1.2 (UniProt)
UniProt
Find proteins for Q5JFR2 (Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)) Explore Q5JFR2  Go to UniProtKB:  Q5JFR2