9YC9 | pdb_00009yc9

Experimental Data Snapshot

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Yu, Z., Abraham, J.

To be published.

Macromolecule Content

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| 3D Structure

Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
UL52	D [auth C]	1,058	Human alphaherpesvirus 1 strain R-15	Mutation(s): 0 Gene Names: UL52
UniProt
Find proteins for A0A5J6DWG4 (Human herpesvirus 1) Explore A0A5J6DWG4 Go to UniProtKB: A0A5J6DWG4
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A5J6DWG4
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Reference Sequence

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Entity ID: 5
Molecule	Chains	Sequence Length	Organism	Details	Image
UL5	E [auth A]	882	Human alphaherpesvirus 1 strain R-15	Mutation(s): 0 Gene Names: UL5
UniProt
Find proteins for A0A5J6DVR7 (Human herpesvirus 1) Explore A0A5J6DVR7 Go to UniProtKB: A0A5J6DVR7
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A5J6DVR7
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Reference Sequence

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Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details	Image
UL30	F [auth E]	1,235	Human alphaherpesvirus 1 strain R-15	Mutation(s): 0 Gene Names: UL30, HHV1gp046 EC: 2.7.7.7
UniProt
Find proteins for H9E937 (Human herpesvirus 1) Explore H9E937 Go to UniProtKB: H9E937
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	H9E937
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Reference Sequence

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Entity ID: 7
Molecule	Chains	Sequence Length	Organism	Details	Image
UL8	G [auth B]	750	Human alphaherpesvirus 1 strain R-15	Mutation(s): 0 Gene Names: UL8
UniProt
Find proteins for P10192 (Human herpesvirus 1 (strain 17)) Explore P10192 Go to UniProtKB: P10192
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P10192
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Reference Sequence

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Entity ID: 8
Molecule	Chains	Sequence Length	Organism	Details	Image
UL42	H [auth F]	488	Human alphaherpesvirus 1 strain R-15	Mutation(s): 0 Gene Names: UL42
UniProt
Find proteins for A0A2Z4HDW2 (Human herpesvirus 1) Explore A0A2Z4HDW2 Go to UniProtKB: A0A2Z4HDW2
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A2Z4HDW2
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Reference Sequence

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Molecule	Chains	Length	Organism
Entity ID: 1
DNA (25-MER)	A [auth D]	25	Human alphaherpesvirus 1 strain R-15
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Reference Sequence

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Molecule	Chains	Length	Organism
Entity ID: 2
DNA (25-MER)	B [auth P]	25	Human alphaherpesvirus 1 strain R-15
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Reference Sequence

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(by identity cutoff)

Molecule	Chains	Length	Organism
Entity ID: 3
DNA (33-MER)	C [auth T]	33	Human alphaherpesvirus 1 strain R-15
Sequence Annotations Expand
Reference Sequence

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
A1BXB (Subject of Investigation/LOI) Query on A1BXB Download:Ideal Coordinates CCD File SDF format, chain J [auth A] MOL2 format, chain J [auth A] mmCIF format, chain J [auth A]	J [auth A]	Pritelivir C₁₈ H₁₈ N₄ O₃ S₂ IVZKZONQVYTCKC-UHFFFAOYSA-N		Interactions Focus chain J [auth A] Interactions & Density Focus chain J [auth A]
ZN Query on ZN Download:Ideal Coordinates CCD File SDF format, chain I [auth C] MOL2 format, chain I [auth C] mmCIF format, chain I [auth C]	I [auth C]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain I [auth C] Interactions & Density Focus chain I [auth C]