9RSV | pdb_00009rsv

Complex of rice blast (Magnaporthe oryzae) effector protein AVR-Pia with the HMA domain of OsHPP09 from rice (Oryza sativa)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 
    0.202 (Depositor), 0.201 (DCC) 
  • R-Value Work: 
    0.176 (Depositor), 0.175 (DCC) 

Starting Models: in silico, experimental
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wwPDB Validation 3D Report Full Report

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This is version 1.1 of the entry. See complete history

Literature

Two folds, many faces: The Magnaporthe oryzae MAX effector AVR-Pia targets novel rice HMA domain-containing proteins.

Maidment, J.H.R.Saile, S.C.Bocquet, A.Thivolle, C.Bourcet, L.Planel, L.F.Gelin, M.Kroj, T.Padilla, A.de Guillen, K.Cesari, S.

(2026) PLoS Pathog 22: e1014382-e1014382

  • DOI: https://doi.org/10.1371/journal.ppat.1014382
  • Primary Citation Related Structures: 
    9RSV

  • PubMed Abstract: 

    Phytopathogenic fungi secrete effector proteins to promote virulence. The MAX (Magnaporthe Avrs and ToxB-like) effectors form a structurally conserved family despite significant sequence diversity. AVR-Pia, a MAX effector from the rice blast fungus Magnaporthe oryzae, is recognised by the model rice nucleotide-binding leucine-rich repeat (NLR) receptor pair OsRGA4/OsRGA5 via direct binding to a heavy metal-associated (HMA) integrated domain (ID) in OsRGA5. While the structural basis of AVR-Pia recognition is well defined, the role of this effector in promoting virulence has remained elusive. Here, we reveal that AVR-Pia specifically interacts with four previously uncharacterised rice HMA domain-containing proteins, three HMA Plant Proteins (OsHPP09, OsHPP10 and OsHPP11), and one HMA Isoprenylated Plant Protein (OsHIPP21). AVR-Pia binds these proteins in vitro and in planta, engaging their HMA domains with differential affinities. Notably, AVR-Pia binds OsHPP09-HMA with considerably higher affinity than the HMA-ID of OsRGA5. By solving the crystal structure of the AVR-Pia/OsHPP09-HMA complex, we identified additional molecular contacts at the interface which underpin high affinity binding. Importantly, the H(I)PPs identified as AVR-Pia interactors are distinct from those bound by the MAX effectors AVR-Pik and Pwl2, underscoring target specialisation within the MAX effector family. Further, structural analyses of the AVR-Pia/OsHPP09-HMA complex revealed a markedly different interface compared to other MAX effector/H(I)PP complexes. Finally, structure-guided mutagenesis of OsHPP09 identified a single residue that is critical for AVR-Pia binding. This work provides structural insight into how distinct MAX effectors exploit HMA domain-containing proteins and offers a foundation towards targeted modification of HMA domains to disrupt effector binding and enhance cereal resistance to blast disease.


  • Organizational Affiliation
    • PHIM Plant Health Institute, Univ Montpellier, INRAE, CIRAD, Institut Agro, IRD, Montpellier, France.

Macromolecule Content 

  • Total Structure Weight: 16.06 kDa 
  • Atom Count: 1,257 
  • Modeled Residue Count: 136 
  • Deposited Residue Count: 145 
  • Unique protein chains: 2

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Os03g0111400 protein75Oryza sativaMutation(s): 0 
Gene Names: Os03g0111400OSNPB_030111400
UniProt
Find proteins for A3ADD6 (Oryza sativa subsp. japonica)
Explore A3ADD6 
Go to UniProtKB:  A3ADD6
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA3ADD6
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
AVR-Pia protein70Pyricularia oryzaeMutation(s): 0 
Gene Names: AVR-Pia
UniProt
Find proteins for B9WZW9 (Pyricularia oryzae)
Explore B9WZW9 
Go to UniProtKB:  B9WZW9
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupB9WZW9
Sequence Annotations
Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free:  0.202 (Depositor), 0.201 (DCC) 
  • R-Value Work:  0.176 (Depositor), 0.175 (DCC) 
Space Group: P 61 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 93.665α = 90
b = 93.665β = 90
c = 72.873γ = 120
Software Package:
Software NamePurpose
EDNAdata collection
XDSdata reduction
PHASERphasing
Aimlessdata scaling
REFMACrefinement

Structure Validation

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Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
European Research Council (ERC)European UnionERC-2019-STG-852482-ii-MAX

Revision History  (Full details and data files)

  • Version 1.0: 2025-08-27
    Type: Initial release
  • Version 1.1: 2026-08-05
    Changes: Database references