9QU3 | pdb_00009qu3

Cryo-EM structure of the human choline transporter-like protein hCTL1 in LMNG

PDB DOI: https://doi.org/10.2210/pdb9QU3/pdb
EM Map EMD-50252: EMDB EMDataResource

Classification: MEMBRANE PROTEIN
Organism(s): Homo sapiens
Expression System: Spodoptera frugiperda
Mutation(s): No

Deposited: 2025-04-10 Released: 2025-05-14
Deposition Author(s): Driller, J.H., Nel, L., Pedersen, B.P.
Funding Organization(s): Lundbeckfonden, H2020 Marie Curie Actions of the European Commission, Danish National Research Foundation, The Carlsberg Foundation

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.20 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

Validation slider image for 9QU3

This is version 1.0 of the entry. See complete history.

Literature

Comparative and structural analysis of choline transport between eukaryotic choline transport protein families FLVCR and CTL

Nel, L., Driller, J.H., Driller, R., Frain, K.M., Pedersen, B.P.

To be published.

Macromolecule Content

Total Structure Weight: 73.89 kDa
Atom Count: 2,889
Modeled Residue Count: 362
Deposited Residue Count: 662
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Choline transporter-like protein 1	A	662	Homo sapiens	Mutation(s): 0 Gene Names: SLC44A1, CD92, CDW92, CTL1
UniProt & NIH Common Fund Data Resources
Find proteins for Q8WWI5 (Homo sapiens) Explore Q8WWI5 Go to UniProtKB: Q8WWI5
PHAROS: Q8WWI5 GTEx: ENSG00000070214
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q8WWI5
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.20 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX	1.21.2_5419

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2025-05-14

Deposition Author(s):

Funding Organization	Location	Grant Number
Lundbeckfonden	Denmark	R380-2021-1207
H2020 Marie Curie Actions of the European Commission	European Union	890822
Danish National Research Foundation	Denmark	0135-00032B
The Carlsberg Foundation	Denmark	CF19-0127

Revision History (Full details and data files)

Version 1.0: 2025-05-14
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.