9KUJ | pdb_00009kuj

Structure of quinone oxidoreductase from Rouxiella badensis

PDB DOI: https://doi.org/10.2210/pdb9KUJ/pdb

Classification: OXIDOREDUCTASE
Organism(s): Rouxiella badensis
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2024-12-04 Released: 2025-12-10
Deposition Author(s): Gao, D.K.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.87 Å
R-Value Free:
0.275 (Depositor), 0.267 (DCC)
R-Value Work:
0.228 (Depositor), 0.235 (DCC)

Starting Model: in silico
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wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Structure of quinone oxidoreductase from Rouxiella badensis

Gao, D.K.

To be published.

Macromolecule Content

Total Structure Weight: 68.95 kDa
Atom Count: 4,900
Modeled Residue Count: 652
Deposited Residue Count: 652
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Quinone oxidoreductase	A, B	326	Rouxiella badensis	Mutation(s): 0 Gene Names: BS640_03185 EC: 1.6.5.5
UniProt
Find proteins for A0A1X0WK01 (Rouxiella badensis) Explore A0A1X0WK01 Go to UniProtKB: A0A1X0WK01
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A1X0WK01
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.87 Å
R-Value Free: 0.275 (Depositor), 0.267 (DCC)
R-Value Work: 0.228 (Depositor), 0.235 (DCC)

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 47.091	α = 90
b = 79.473	β = 90
c = 173.061	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
MOLREP	phasing

Structure Validation

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Entry History & Funding Information

Deposition Data

Released Date: 2025-12-10

Deposition Author(s):

Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	--

Revision History (Full details and data files)

Version 1.0: 2025-12-10
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.