9KD6 | pdb_00009kd6

Structural Basis for the Recognition of Blood Group Trisaccharides by Tulane virus

• PDB DOI: https://doi.org/10.2210/pdb9KD6/pdb
• EM Map EMD-62263: EMDB EMDataResource

• Classification: VIRAL PROTEIN
• Organism(s): Rhesus macaque recovirus
• Expression System: Spodoptera frugiperda
• Mutation(s): No 


• Deposited: 2024-11-03 Released: 2025-11-05 
• Deposition Author(s): Qian, Y., Cong, Y., Li, X., Chen, Y.
• Funding Organization(s): Not funded

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.60 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Structural Basis for the Recognition of Blood Group Trisaccharides by Tulane virus

Qian, Y., Cong, J., Li, X., Chen, Y.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: electron microscopy

Macromolecule Content 

• Total Structure Weight: 115.49 kDa 
• Atom Count: 7,740 
• Modeled Residue Count: 1,014 
• Deposited Residue Count: 1,070 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Capsid protein	A, B	535	Rhesus macaque recovirus	Mutation(s): 0
UniProt
Find proteins for A0A067YMZ3 (Rhesus macaque recovirus) Explore A0A067YMZ3  Go to UniProtKB:  A0A067YMZ3

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.60 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX

Structure Validation

Entry History 

& Funding Information

Deposition Data

• Released Date: 2025-11-05 
Deposition Author(s): Qian, Y., Cong, Y., Li, X., Chen, Y.

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Funding Organization	Location	Grant Number
Not funded		--

Revision History  

• Version 1.0: 2025-11-05
  Type: Initial release