9JDQ | pdb_00009jdq

Crystal structure of reductase EA

PDB DOI: https://doi.org/10.2210/pdb9JDQ/pdb

Classification: OXIDOREDUCTASE
Organism(s): Exiguobacterium acetylicum
Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG
Mutation(s): No

Deposited: 2024-09-01 Released: 2024-09-18
Deposition Author(s): Tang, J., Liuqing, C.
Funding Organization(s): Other private

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.71 Å
R-Value Free:
0.250 (Depositor), 0.267 (DCC)
R-Value Work:
0.230 (Depositor), 0.238 (DCC)
R-Value Observed:
0.230 (Depositor)

Starting Model: in silico
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wwPDB Validation 3D Report Full Report

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This is version 1.0 of the entry. See complete history.

Literature

crystal structure of reductase LSADH

Tang, J., Liuqing, C.

To be published.

Macromolecule Content

Total Structure Weight: 56.55 kDa
Atom Count: 4,314
Modeled Residue Count: 498
Deposited Residue Count: 512
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Oxidoreductase	A, B	256	Exiguobacterium acetylicum	Mutation(s): 0 Gene Names: ker
UniProt
Find proteins for Q6BDS0 (Exiguobacterium acetylicum) Explore Q6BDS0 Go to UniProtKB: Q6BDS0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q6BDS0
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.71 Å
R-Value Free: 0.250 (Depositor), 0.267 (DCC)
R-Value Work: 0.230 (Depositor), 0.238 (DCC)
R-Value Observed: 0.230 (Depositor)

Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 142.747	α = 90
b = 67.67	β = 117.88
c = 74.549	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
xia2	data reduction
xia2	data scaling
MOLREP	phasing

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2024-09-18

Deposition Author(s):

Funding Organization	Location	Grant Number
Other private		--

Revision History (Full details and data files)

Version 1.0: 2024-09-18
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.