9J64 | pdb_00009j64

Deposited: 2024-08-14 Released: 2025-09-03
Deposition Author(s): Dai, Z., Liang, L., Yin, Y.X.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Dai, Z., Liang, L., Yin, Y.X.

To be published.

Macromolecule Content

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| 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Cullin-2	A, B [auth D]	751	Homo sapiens	Mutation(s): 0 Gene Names: CUL2
UniProt & NIH Common Fund Data Resources
Find proteins for Q13617 (Homo sapiens) Explore Q13617 Go to UniProtKB: Q13617
PHAROS: Q13617 GTEx: ENSG00000108094
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q13617
Sequence Annotations Expand
Reference Sequence

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| 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
E3 ubiquitin-protein ligase RBX1	C [auth E], F [auth H]	108	Homo sapiens	Mutation(s): 0 Gene Names: RBX1, RNF75, ROC1 EC: 2.3.2.27 (PDB Primary Data), 2.3.2.32 (PDB Primary Data)
UniProt & NIH Common Fund Data Resources
Find proteins for P62877 (Homo sapiens) Explore P62877 Go to UniProtKB: P62877
PHAROS: P62877 GTEx: ENSG00000100387
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P62877
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Reference Sequence

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| 3D Structure

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
Elongin-C	D [auth F]	98	Homo sapiens	Mutation(s): 0 Gene Names: ELOC, TCEB1
UniProt & NIH Common Fund Data Resources
Find proteins for Q15369 (Homo sapiens) Explore Q15369 Go to UniProtKB: Q15369
PHAROS: Q15369 GTEx: ENSG00000154582
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q15369
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Reference Sequence

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Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
Elongin-B	E [auth G]	104	Homo sapiens	Mutation(s): 0 Gene Names: ELOB, TCEB2
UniProt & NIH Common Fund Data Resources
Find proteins for Q15370 (Homo sapiens) Explore Q15370 Go to UniProtKB: Q15370
PHAROS: Q15370 GTEx: ENSG00000103363
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q15370
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Reference Sequence

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| 3D Structure

Entity ID: 5
Molecule	Chains	Sequence Length	Organism	Details	Image
Protein fem-1 homolog B	G [auth I]	628	Homo sapiens	Mutation(s): 0 Gene Names: FEM1B, F1AA, KIAA0396
UniProt & NIH Common Fund Data Resources
Find proteins for Q9UK73 (Homo sapiens) Explore Q9UK73 Go to UniProtKB: Q9UK73
PHAROS: Q9UK73 GTEx: ENSG00000169018
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9UK73
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Reference Sequence

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| 3D Structure

Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details	Image
Maltose/maltodextrin-binding periplasmic protein,Folliculin interacting protein 1	H [auth J]	467	Escherichia coli K-12, Homo sapiens This entity is chimeric	Mutation(s): 0 Gene Names: malE, b4034, JW3994, FNIP1
UniProt & NIH Common Fund Data Resources
Find proteins for J3KNG8 (Homo sapiens) Explore J3KNG8 Go to UniProtKB: J3KNG8
GTEx: ENSG00000217128
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	J3KNG8
Sequence Annotations Expand
Reference Sequence

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZN (Subject of Investigation/LOI) Query on ZN Download:Ideal Coordinates CCD File SDF format, chain I [auth E] SDF format, chain J [auth E] SDF format, chain K [auth E] SDF format, chain L [auth H] SDF format, chain M [auth H] SDF format, chain N [auth H] SDF format, chain O [auth I] MOL2 format, chain I [auth E] MOL2 format, chain J [auth E] MOL2 format, chain K [auth E] MOL2 format, chain L [auth H] MOL2 format, chain M [auth H] MOL2 format, chain N [auth H] MOL2 format, chain O [auth I] mmCIF format, chain I [auth E] mmCIF format, chain J [auth E] mmCIF format, chain K [auth E] mmCIF format, chain L [auth H] mmCIF format, chain M [auth H] mmCIF format, chain N [auth H] mmCIF format, chain O [auth I]	I [auth E] J [auth E] K [auth E] L [auth H] M [auth H] I [auth E], J [auth E], K [auth E], L [auth H], M [auth H], N [auth H], O [auth I]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain I [auth E] Focus chain J [auth E] Focus chain K [auth E] Focus chain L [auth H] Focus chain M [auth H] Focus chain N [auth H] Focus chain O [auth I] Interactions & Density Focus chain I [auth E] Focus chain J [auth E] Focus chain K [auth E] Focus chain L [auth H] Focus chain M [auth H] Focus chain N [auth H] Focus chain O [auth I]