Crystal structure of Tetraspanin CD82 Large Extracellular Loop (LEL)
Nagarathinam, K., Krey, T.To be published.
Experimental Data Snapshot
Starting Model: in silico
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| CD82 antigen | 123 | Homo sapiens | Mutation(s): 3  Gene Names: CD82, KAI1, SAR2, ST6, TSPAN27 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P27701 (Homo sapiens) Explore P27701  Go to UniProtKB:  P27701 | |||||
PHAROS:  P27701 GTEx:  ENSG00000085117  | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P27701 | ||||
Sequence AnnotationsExpand | |||||
| |||||
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PEG Query on PEG | C [auth A] D [auth A] E [auth B] F [auth B] G [auth B] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 51.42 | α = 90 |
| b = 62.67 | β = 90 |
| c = 97.61 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| MxCuBE | data collection |
| XDS | data reduction |
| XSCALE | data scaling |
| SHELXDE | phasing |
| Coot | model building |
| BUCCANEER | model building |
| Funding Organization | Location | Grant Number |
|---|---|---|
| Not funded | -- |