9E6P | pdb_00009e6p

Structure of a Mouse KC dimeric mutant

PDB DOI: https://doi.org/10.2210/pdb9E6P/pdb

Classification: CYTOKINE
Organism(s): Mus musculus
Expression System: Escherichia coli
Mutation(s): Yes

Deposited: 2024-10-30 Released: 2025-11-12
Deposition Author(s): White, M.A., Sepuru, K.M., Rajarathnam, K.
Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.20 Å
R-Value Free:
0.280 (Depositor), 0.278 (DCC)
R-Value Work:
0.231 (Depositor), 0.231 (DCC)
R-Value Observed:
0.236 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Structure of a Mouse KC dimeric mutant

White, M.A., Sepuru, K.M., Rajarathnam, K.

To be published.

Macromolecule Content

Total Structure Weight: 15.71 kDa
Atom Count: 929
Modeled Residue Count: 129
Deposited Residue Count: 146
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Growth-regulated alpha protein	A, B	73	Mus musculus	Mutation(s): 1 Gene Names: Cxcl1, Gro, Gro1, Mgsa, Scyb1
UniProt & NIH Common Fund Data Resources
Find proteins for P12850 (Mus musculus) Explore P12850 Go to UniProtKB: P12850
IMPC: MGI:108068
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P12850
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 3.20 Å
R-Value Free: 0.280 (Depositor), 0.278 (DCC)
R-Value Work: 0.231 (Depositor), 0.231 (DCC)
R-Value Observed: 0.236 (Depositor)

Space Group: P 2₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 44.859	α = 90
b = 72.184	β = 90
c = 42.81	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2025-11-12

Deposition Author(s):

Rajarathnam, K.

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)	United States	AI160613

Revision History (Full details and data files)

Version 1.0: 2025-11-12
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.