8ZGU | pdb_00008zgu

Crystal structural of HTNV Gn and AH100 Fab

• PDB DOI: https://doi.org/10.2210/pdb8ZGU/pdb

• Classification: VIRAL PROTEIN/IMMUNE SYSTEM
• Organism(s): Orthohantavirus hantanense, Homo sapiens
• Expression System: Trichoplusia ni, Homo sapiens
• Mutation(s): No 


• Deposited: 2024-05-09 Released: 2024-07-24 
• Deposition Author(s): Wang, F.R., Wu, Y., Gao, F.
• Funding Organization(s): Ministry of Science and Technology (MoST, China), National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 3.51 Å
• R-Value Free: 
  0.295 (Depositor), 0.290 (DCC) 
• R-Value Work: 
  0.253 (Depositor), 0.250 (DCC) 
• R-Value Observed: 
  0.255 (Depositor) 

Starting Model: in silico

Literature

Crystal structural of HTNV Gn and AH100 Fab

Wang, F.R., Wu, Y., Gao, F.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 3-mer - A1B1C1 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Macromolecule Content 

• Total Structure Weight: 85.1 kDa 
• Atom Count: 5,823 
• Modeled Residue Count: 770 
• Deposited Residue Count: 790 
• Unique protein chains: 3

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Envelopment polyprotein	A	350	Orthohantavirus hantanense	Mutation(s): 0
UniProt
Find proteins for A0A077D153 (Orthohantavirus hantanense) Explore A0A077D153  Go to UniProtKB:  A0A077D153

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
AH100 heavy chain	B [auth H]	225	Homo sapiens	Mutation(s): 0

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
AH100 light chain	C [auth L]	215	Homo sapiens	Mutation(s): 0

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 3.51 Å
• R-Value Free:  0.295 (Depositor), 0.290 (DCC) 
• R-Value Work:  0.253 (Depositor), 0.250 (DCC) 
• R-Value Observed: 0.255 (Depositor) 

Space Group: I 4 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 170.38	α = 90
b = 170.38	β = 90
c = 117.114	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
PHENIX	refinement
XDS	data reduction
XDS	data scaling
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-07-24 
Deposition Author(s): Wang, F.R., Wu, Y., Gao, F.

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Funding Organization	Location	Grant Number
Ministry of Science and Technology (MoST, China)	China	2022YFC2303402
National Natural Science Foundation of China (NSFC)	China	32090014
National Natural Science Foundation of China (NSFC)	China	82022042

Revision History  

• Version 1.0: 2024-07-24
  Type: Initial release
  
• Version 1.1: 2024-10-09
  Changes: Structure summary