8YA8

The crystal structure of human Rtel1 HHD2 domain

• PDB DOI: https://doi.org/10.2210/pdb8YA8/pdb

• Classification: HYDROLASE
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2024-02-08 Released: 2024-02-28 
• Deposition Author(s): Chun, I.S., Kim, M.S.
• Funding Organization(s): National Research Foundation (NRF, Korea)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.85 Å
• R-Value Free: 0.268 
• R-Value Work: 0.239 
• R-Value Observed: 0.241 

Literature

The crystal structure of human Rtel1 HHD2 domain

Chun, I.S., Kim, M.S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors.

Biological Assembly 3  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 3 assigned by authors.

Biological Assembly 4  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 4 assigned by authors.

Biological Assembly 5  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 5 assigned by authors.

Biological Assembly 6  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 6 assigned by authors.

Biological Assembly 7  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 7 assigned by authors.

Macromolecule Content

• Total Structure Weight: 68.16 kDa 
• Atom Count: 4,365 
• Modelled Residue Count: 561 
• Deposited Residue Count: 630 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Regulator of telomere elongation helicase 1	A, B, C, D, E, F, G	90	Homo sapiens	Mutation(s): 0  Gene Names: RTEL1, C20orf41, KIAA1088, NHL EC: 3.6.4.12
UniProt & NIH Common Fund Data Resources
Find proteins for Q9NZ71 (Homo sapiens) Explore Q9NZ71  Go to UniProtKB:  Q9NZ71
PHAROS:  Q9NZ71 GTEx:  ENSG00000258366

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.85 Å
• R-Value Free: 0.268 
• R-Value Work: 0.239 
• R-Value Observed: 0.241 
• Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 66.052	α = 90
b = 61.958	β = 95.14
c = 79.953	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHENIX	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-02-28 
Deposition Author(s): Chun, I.S., Kim, M.S.

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Funding Organization	Location	Grant Number
National Research Foundation (NRF, Korea)	Korea, Republic Of	--

Revision History  

• Version 1.0: 2024-02-28
  Type: Initial release