8WJ3 | pdb_00008wj3

Deposited: 2023-09-25 Released: 2024-09-11
Deposition Author(s): Yu, G., Liao, F., Li, X., Li, Z., Zhang, H.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Macromolecule Content

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Helicase HerA central domain-containing protein	A [auth D], B [auth M], C [auth N], D [auth O], E [auth L]	696	Paenibacillus sp. 453mf	Mutation(s): 0 Gene Names: SAMN04488601_104156
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
AGS (Subject of Investigation/LOI) Query on AGS Download Ideal Coordinates CCD File SDF format, chain F [auth M] SDF format, chain H [auth O] SDF format, chain J [auth L] MOL2 format, chain F [auth M] MOL2 format, chain H [auth O] MOL2 format, chain J [auth L] mmCIF format, chain F [auth M] mmCIF format, chain H [auth O] mmCIF format, chain J [auth L]	F [auth M], H [auth O], J [auth L]	PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER C₁₀ H₁₆ N₅ O₁₂ P₃ S NLTUCYMLOPLUHL-KQYNXXCUSA-N		Interactions Focus chain F [auth M] Focus chain H [auth O] Focus chain J [auth L] Interactions & Density Focus chain F [auth M] Focus chain H [auth O] Focus chain J [auth L]
MG (Subject of Investigation/LOI) Query on MG Download Ideal Coordinates CCD File SDF format, chain G [auth M] SDF format, chain I [auth O] SDF format, chain K [auth L] MOL2 format, chain G [auth M] MOL2 format, chain I [auth O] MOL2 format, chain K [auth L] mmCIF format, chain G [auth M] mmCIF format, chain I [auth O] mmCIF format, chain K [auth L]	G [auth M], I [auth O], K [auth L]	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N		Interactions Focus chain G [auth M] Focus chain I [auth O] Focus chain K [auth L] Interactions & Density Focus chain G [auth M] Focus chain I [auth O] Focus chain K [auth L]