8TEK

Baseplate of Nexin-dynein regulatory complex from Tetrahymena thermophila


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Integrated modeling of the Nexin-dynein regulatory complex reveals its regulatory mechanism.

Ghanaeian, A.Majhi, S.McCafferty, C.L.Nami, B.Black, C.S.Yang, S.K.Legal, T.Papoulas, O.Janowska, M.Valente-Paterno, M.Marcotte, E.M.Wloga, D.Bui, K.H.

(2023) Nat Commun 14: 5741-5741

  • DOI: https://doi.org/10.1038/s41467-023-41480-7
  • Primary Citation of Related Structures:  
    8TEK, 8TH8, 8TID

  • PubMed Abstract: 

    Cilia are hairlike protrusions that project from the surface of eukaryotic cells and play key roles in cell signaling and motility. Ciliary motility is regulated by the conserved nexin-dynein regulatory complex (N-DRC), which links adjacent doublet microtubules and regulates and coordinates the activity of outer doublet complexes. Despite its critical role in cilia motility, the assembly and molecular basis of the regulatory mechanism are poorly understood. Here, using cryo-electron microscopy in conjunction with biochemical cross-linking and integrative modeling, we localize 12 DRC subunits in the N-DRC structure of Tetrahymena thermophila. We also find that the CCDC96/113 complex is in close contact with the DRC9/10 in the linker region. In addition, we reveal that the N-DRC is associated with a network of coiled-coil proteins that most likely mediates N-DRC regulatory activity.


  • Organizational Affiliation

    Department of Anatomy and Cell Biology, Faculty of Medicine and Health Sciences, McGill University, Québec, Canada.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Dynein regulatory complex protein 1/2 N-terminal domain-containing protein826Tetrahymena thermophilaMutation(s): 0 
UniProt
Find proteins for Q229S1 (Tetrahymena thermophila (strain SB210))
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UniProt GroupQ229S1
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Coiled-coil protein, putative506Tetrahymena thermophilaMutation(s): 0 
UniProt
Find proteins for Q24DJ0 (Tetrahymena thermophila (strain SB210))
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UniProt GroupQ24DJ0
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Growth-arrest-specific microtubule-binding proteinC [auth D]472Tetrahymena thermophilaMutation(s): 0 
UniProt
Find proteins for I7LT80 (Tetrahymena thermophila (strain SB210))
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Growth-arrest-specific microtubule-binding proteinD [auth E]468Tetrahymena thermophilaMutation(s): 0 
UniProt
Find proteins for Q23YW7 (Tetrahymena thermophila (strain SB210))
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UniProt GroupQ23YW7
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Cilia- and flagella-associated protein 91E [auth M]644Tetrahymena thermophilaMutation(s): 0 
UniProt
Find proteins for I7LWP7 (Tetrahymena thermophila (strain SB210))
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UniProt GroupI7LWP7
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
Flagella associated proteinF [auth N]963Tetrahymena thermophilaMutation(s): 0 
UniProt
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
Coiled-coil protein, putativeG [auth O]893Tetrahymena thermophilaMutation(s): 0 
UniProt
Find proteins for Q233L0 (Tetrahymena thermophila (strain SB210))
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
DUF4201 domain-containing proteinH [auth P]794Tetrahymena thermophilaMutation(s): 0 
UniProt
Find proteins for I7M6D6 (Tetrahymena thermophila (strain SB210))
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
Flagellar associated proteinI [auth T]361Tetrahymena thermophilaMutation(s): 0 
UniProt
Find proteins for Q22KK0 (Tetrahymena thermophila (strain SB210))
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP20J [auth g]195Tetrahymena thermophilaMutation(s): 0 
UniProt
Find proteins for Q22NU3 (Tetrahymena thermophila (strain SB210))
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Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Canadian Institutes of Health Research (CIHR)CanadaPJT-156354
Natural Sciences and Engineering Research Council (NSERC, Canada)CanadaRGPIN-2022-04774

Revision History  (Full details and data files)

  • Version 1.0: 2023-09-20
    Type: Initial release
  • Version 1.1: 2023-09-27
    Changes: Database references