BAM orchestrates OMP biogenesis using a beta-templating mechanism
Wu, R., Ryoo, D., Kuo, K.M., Gumbart, J.C., Noinaj, N.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Outer membrane protein assembly factor BamA | 786 | Escherichia coli | Mutation(s): 0  Gene Names: bamA Membrane Entity: Yes  | ||
UniProt | |||||
Find proteins for P0A940 (Escherichia coli (strain K12)) Explore P0A940  Go to UniProtKB:  P0A940 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A940 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Outer membrane protein assembly factor BamB | 372 | Escherichia coli | Mutation(s): 0  Gene Names: bamB, yfgL, b2512, JW2496 Membrane Entity: Yes  | ||
UniProt | |||||
Find proteins for P77774 (Escherichia coli (strain K12)) Explore P77774  Go to UniProtKB:  P77774 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P77774 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Outer membrane protein assembly factor BamC | 319 | Escherichia coli | Mutation(s): 0  Gene Names: bamC Membrane Entity: Yes  | ||
UniProt | |||||
Find proteins for P0A903 (Escherichia coli (strain K12)) Explore P0A903  Go to UniProtKB:  P0A903 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A903 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Outer membrane protein assembly factor BamD | 225 | Escherichia coli | Mutation(s): 0  Gene Names: bamD Membrane Entity: Yes  | ||
UniProt | |||||
Find proteins for P0AC02 (Escherichia coli (strain K12)) Explore P0AC02  Go to UniProtKB:  P0AC02 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AC02 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 5 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Outer membrane protein assembly factor BamE | 93 | Escherichia coli | Mutation(s): 0  Gene Names: bamE, smpA, smpA_1, smpA_2 Membrane Entity: Yes  | ||
UniProt | |||||
Find proteins for P0A937 (Escherichia coli (strain K12)) Explore P0A937  Go to UniProtKB:  P0A937 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A937 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 6 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Maltose/maltodextrin-binding periplasmic protein,Autotransporter protein EspP translocator | 551 | Escherichia coli O157 | Mutation(s): 0  Gene Names: malE, Z5632, ECs5017, espP, L7020, ECO57PM78 EC: 3.4.21 Membrane Entity: Yes  | ||
UniProt | |||||
Find proteins for P0AEX9 (Escherichia coli (strain K12)) Explore P0AEX9  Go to UniProtKB:  P0AEX9 | |||||
Find proteins for O32591 (Escherichia coli) Explore O32591  Go to UniProtKB:  O32591 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Groups | O32591P0AEX9 | ||||
Sequence AnnotationsExpand | |||||
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Task | Software Package | Version |
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MODEL REFINEMENT | PHENIX | 1.18rc1_3777: |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | 1R01GM127884 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | 1R01GM127896 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | 1R01GM123169 |