8SGQ

CCT G beta 5 complex intermediate state


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.70 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Visualizing the chaperone-mediated folding trajectory of the G protein beta 5 beta-propeller.

Wang, S.Sass, M.I.Kwon, Y.Ludlam, W.G.Smith, T.M.Carter, E.J.Gladden, N.E.Riggi, M.Iwasa, J.H.Willardson, B.M.Shen, P.S.

(2023) Mol Cell 83: 3852-3868.e6

  • DOI: https://doi.org/10.1016/j.molcel.2023.09.032
  • Primary Citation of Related Structures:  
    8SFE, 8SFF, 8SG8, 8SG9, 8SGC, 8SGL, 8SGQ, 8SH9, 8SHA, 8SHD, 8SHE, 8SHF, 8SHG, 8SHL, 8SHN, 8SHO, 8SHP, 8SHQ, 8SHT

  • PubMed Abstract: 

    The Chaperonin Containing Tailless polypeptide 1 (CCT) complex is an essential protein folding machine with a diverse clientele of substrates, including many proteins with β-propeller domains. Here, we determine the structures of human CCT in complex with its accessory co-chaperone, phosducin-like protein 1 (PhLP1), in the process of folding Gβ 5 , a component of Regulator of G protein Signaling (RGS) complexes. Cryoelectron microscopy (cryo-EM) and image processing reveal an ensemble of distinct snapshots that represent the folding trajectory of Gβ 5 from an unfolded molten globule to a fully folded β-propeller. These structures reveal the mechanism by which CCT directs Gβ 5 folding through initiating specific intermolecular contacts that facilitate the sequential folding of individual β sheets until the propeller closes into its native structure. This work directly visualizes chaperone-mediated protein folding and establishes that CCT orchestrates folding by stabilizing intermediates through interactions with surface residues that permit the hydrophobic core to coalesce into its folded state.


  • Organizational Affiliation

    Department of Biochemistry, School of Medicine, University of Utah, 15 N. Medical Drive East, Salt Lake City, UT 84112, USA.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
T-complex protein 1 subunit zetaA [auth z],
B [auth Z]
508Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000146731 
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UniProt GroupP40227
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
T-complex protein 1 subunit alphaC [auth a],
G [auth A]
536Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000120438 
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UniProt GroupP17987
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
T-complex protein 1 subunit gammaD [auth g],
H [auth G]
528Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000163468 
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
T-complex protein 1 subunit eta, N-terminally processedE [auth h],
I [auth H]
514Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000135624 
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
T-complex protein 1 subunit thetaF [auth q],
J [auth Q]
498Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000156261 
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
T-complex protein 1 subunit betaK [auth B],
N [auth b]
526Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000166226 
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
T-complex protein 1 subunit deltaL [auth D],
O [auth d]
520Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000115484 
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
T-complex protein 1 subunit epsilonM [auth E],
P [auth e]
540Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000150753 
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Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
ADP
Query on ADP

Download Ideal Coordinates CCD File 
AA [auth B]
BA [auth D]
CA [auth E]
DA [auth b]
EA [auth d]
AA [auth B],
BA [auth D],
CA [auth E],
DA [auth b],
EA [auth d],
FA [auth e],
Q [auth z],
R [auth Z],
S [auth a],
T [auth g],
U [auth h],
V [auth q],
W [auth A],
X [auth G],
Y [auth H],
Z [auth Q]
ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.70 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONcryoSPARC4.2.1

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Eye Institute (NIH/NEI)United StatesR01 EY012287

Revision History  (Full details and data files)

  • Version 1.0: 2023-11-01
    Type: Initial release
  • Version 1.1: 2023-11-15
    Changes: Database references