8QK3

Human Adenovirus type 11 fiber knob in complex with its cell receptors, Desmoglein-2 and CD46


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.20 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Toward the understanding of DSG2 and CD46 interaction with HAdV-11 fiber, a super-complex analysis.

Effantin, G.Hograindleur, M.-.A.Fenel, D.Fender, P.Vassal-Stermann, E.

(2023) J Virol 97: e0091023-e0091023

  • DOI: https://doi.org/10.1128/jvi.00910-23
  • Primary Citation of Related Structures:  
    8QJX, 8QJY, 8QK3

  • PubMed Abstract: 

    The main limitation of oncolytic vectors is neutralization by blood components, which prevents intratumoral administration to patients. Enadenotucirev, a chimeric HAdV-11p/HAdV-3 adenovirus identified by bio-selection, is a low seroprevalence vector active against a broad range of human carcinoma cell lines. At this stage, there's still some uncertainty about tropism and primary receptor utilization by HAdV-11. However, this information is very important, as it has a direct influence on the effectiveness of HAdV-11-based vectors. The aim of this work is to determine which of the two receptors, DSG2 and CD46, is involved in the attachment of the virus to the host, and what role they play in the early stages of infection.


  • Organizational Affiliation

    Université Grenoble Alpes, CNRS, CEA, IBS , Grenoble, France.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Fiber proteinA [auth B],
B [auth A],
C
325Human adenovirus 11Mutation(s): 0 
Gene Names: L5
UniProt
Find proteins for P35774 (Human adenovirus B serotype 11 (strain Slobiski))
Explore P35774 
Go to UniProtKB:  P35774
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP35774
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Membrane cofactor proteinD [auth E]392Homo sapiensMutation(s): 0 
Gene Names: CD46
UniProt & NIH Common Fund Data Resources
Find proteins for P15529 (Homo sapiens)
Explore P15529 
Go to UniProtKB:  P15529
PHAROS:  P15529
GTEx:  ENSG00000117335 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP15529
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Desmoglein-2E [auth D]1,118Homo sapiensMutation(s): 0 
Gene Names: DSG2
UniProt & NIH Common Fund Data Resources
Find proteins for Q14126 (Homo sapiens)
Explore Q14126 
Go to UniProtKB:  Q14126
PHAROS:  Q14126
GTEx:  ENSG00000046604 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ14126
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.20 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data

  • Released Date: 2023-11-01 
  • Deposition Author(s): Effantin, G.

Funding OrganizationLocationGrant Number
Agence Nationale de la Recherche (ANR)FranceANR-18-CE11-0001

Revision History  (Full details and data files)

  • Version 1.0: 2023-11-01
    Type: Initial release
  • Version 1.1: 2023-11-15
    Changes: Database references
  • Version 1.2: 2023-12-13
    Changes: Database references