8PUI

human PHOX2B C-terminal domain including the polyA fragment at 298K


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: target function 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Alternative low-populated conformations prompt phase transitions in polyalanine repeat expansions.

Anton, R.Trevino, M.A.Pantoja-Uceda, D.Felix, S.Babu, M.Cabrita, E.J.Zweckstetter, M.Tinnefeld, P.Vera, A.M.Oroz, J.

(2024) Nat Commun 15: 1925-1925

  • DOI: https://doi.org/10.1038/s41467-024-46236-5
  • Primary Citation of Related Structures:  
    8PTL, 8PUI

  • PubMed Abstract: 

    Abnormal trinucleotide repeat expansions alter protein conformation causing malfunction and contribute to a significant number of incurable human diseases. Scarce structural insights available on disease-related homorepeat expansions hinder the design of effective therapeutics. Here, we present the dynamic structure of human PHOX2B C-terminal fragment, which contains the longest polyalanine segment known in mammals. The major α-helical conformation of the polyalanine tract is solely extended by polyalanine expansions in PHOX2B, which are responsible for most congenital central hypoventilation syndrome cases. However, polyalanine expansions in PHOX2B additionally promote nascent homorepeat conformations that trigger length-dependent phase transitions into solid condensates that capture wild-type PHOX2B. Remarkably, HSP70 and HSP90 chaperones specifically seize PHOX2B alternative conformations preventing phase transitions. The precise observation of emerging polymorphs in expanded PHOX2B postulates unbalanced phase transitions as distinct pathophysiological mechanisms in homorepeat expansion diseases, paving the way towards the search of therapeutics modulating biomolecular condensates in central hypoventilation syndrome.


  • Organizational Affiliation

    Instituto de Química Física Blas Cabrera (IQF), CSIC, E-28006, Madrid, Spain.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Paired mesoderm homeobox protein 2B87Homo sapiensMutation(s): 0 
Gene Names: PHOX2BPMX2B
UniProt & NIH Common Fund Data Resources
Find proteins for Q99453 (Homo sapiens)
Explore Q99453 
Go to UniProtKB:  Q99453
PHAROS:  Q99453
GTEx:  ENSG00000109132 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ99453
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: target function 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Spanish Ministry of Science, Innovation, and UniversitiesSpainPID2019-109276RA-I00

Revision History  (Full details and data files)

  • Version 1.0: 2024-03-13
    Type: Initial release