8OM7

Human Mitochondrial Lon Y186E Mutant ADP Bound

• PDB DOI: https://doi.org/10.2210/pdb8OM7/pdb
• EM Map EMD-16970: EMDB EMDataResource

• Classification: HYDROLASE
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): Yes 


• Deposited: 2023-03-31 Released: 2024-04-10 
• Deposition Author(s): Kereiche, S., Bauer, J.A., Matyas, P., Novacek, J., Kutejova, E.
• Funding Organization(s): Other government, European Regional Development Fund, Ministry of Education, Youth and Sports of the Czech Republic, Czech Science Foundation

---

Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.74 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Phosphorylation of the N-terminal domain of human mitochondrial Lon protease disrupts its functions

Ondrovicova, G., Kunova, N., Kereiche, S., Pinkas, M., Krajcovicova, V., Bauer, J.A., Stojkovicova, B., Havalova, H., Lukacova, V., Kohutova, L., Martinakova, L., Barath, P., Novacek, J., Kutejova, E., Pevala, V.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Homo 6-mer - A6 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: electron microscopy

Macromolecule Content

• Total Structure Weight: 591.56 kDa 
• Atom Count: 36,990 
• Modelled Residue Count: 4,656 
• Deposited Residue Count: 5,214 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Lon protease homolog, mitochondrial	A, B, C, D, E, F	869	Homo sapiens	Mutation(s): 1  Gene Names: LONP1, PRSS15 EC: 3.4.21.53
UniProt & NIH Common Fund Data Resources
Find proteins for P36776 (Homo sapiens) Explore P36776  Go to UniProtKB:  P36776
PHAROS:  P36776 GTEx:  ENSG00000196365

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ADP	G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.74 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX	1.21rc1_4895

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-04-10 
Deposition Author(s): Kereiche, S., Bauer, J.A., Matyas, P., Novacek, J., Kutejova, E.

---

Funding Organization	Location	Grant Number
Other government		APVV-15-0375
Other government		APVV-19-0298
Other government		VEGA-2/0069/23
Other government		VEGA-2/0131/20
European Regional Development Fund	European Union	ITMS:305011X666
Ministry of Education, Youth and Sports of the Czech Republic	Czech Republic	CIISB project LM2018127
Czech Science Foundation	Czech Republic	1825144Y

Revision History  

• Version 1.0: 2024-04-10
  Type: Initial release