8K0A | pdb_00008k0a

CryoEM structure of 3-phenylpropionate/cinnamic acid dioxygenase HcaE-HcaF complex

PDB DOI: https://doi.org/10.2210/pdb8K0A/pdb
EM Map EMD-36758: EMDB EMDataResource

Classification: BIOSYNTHETIC PROTEIN
Organism(s): Escherichia coli K-12
Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG
Mutation(s): No

Deposited: 2023-07-07 Released: 2024-07-10
Deposition Author(s): Jiang, W.X., Cheng, X.Q., Ma, L.X., Xing, Q.
Funding Organization(s): National Basic Research Program of China (973 Program)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

Validation slider image for 8K0A

This is version 1.0 of the entry. See complete history.

Literature

CryoEM structure of 3-phenylpropionate/cinnamic acid dioxygenase HcaE-HcaF complex

Jiang, W.X., Cheng, X.Q., Wu, M., Ma, L.X., Xing, Q.

To be published.

Macromolecule Content

Total Structure Weight: 215.33 kDa
Atom Count: 14,952
Modeled Residue Count: 1,845
Deposited Residue Count: 1,875
Unique protein chains: 2

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
3-phenylpropionate/cinnamic acid dioxygenase subunit alpha	A, C, E	453	Escherichia coli K-12	Mutation(s): 0 Gene Names: hcaE, digA, hcaA, hcaA1, phdC1, yfhU, b2538, JW2522 EC: 1.14.12.19
UniProt
Find proteins for P0ABR5 (Escherichia coli (strain K12)) Explore P0ABR5 Go to UniProtKB: P0ABR5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0ABR5
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
3-phenylpropionate/cinnamic acid dioxygenase subunit beta	B, D, F	172	Escherichia coli K-12	Mutation(s): 0 Gene Names: hcaF, digB, hcaA2, hcaB, phdC2, yfhV, b2539, JW2523 EC: 1.14.12.19
UniProt
Find proteins for Q47140 (Escherichia coli (strain K12)) Explore Q47140 Go to UniProtKB: Q47140
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q47140
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2024-07-10

Deposition Author(s):

Funding Organization	Location	Grant Number
National Basic Research Program of China (973 Program)	China	2021YFC2100100

Revision History (Full details and data files)

Version 1.0: 2024-07-10
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.