8JWX

bottom segment of the bacteriophage M13 mini variant

• PDB DOI: https://doi.org/10.2210/pdb8JWX/pdb
• EM Map EMD-35794: EMDB EMDataResource

• Classification: VIRAL PROTEIN
• Organism(s): Inovirus M13
• Expression System: Escherichia
• Mutation(s): No 


• Deposited: 2023-06-29 Released: 2024-01-03 
• Deposition Author(s): Xiang, Y., Jia, Q.
• Funding Organization(s): Ministry of Science and Technology (MoST, China), National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.30 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Cryo-EM structure of a bacteriophage M13 mini variant

Xiang, Y., Jia, Q.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C5  (Explore in 3D)
Global Stoichiometry: Hetero 25-mer - A15B5C5 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: electron microscopy

Macromolecule Content

• Total Structure Weight: 353.3 kDa 
• Atom Count: 14,790 
• Modelled Residue Count: 1,950 
• Deposited Residue Count: 3,340 
• Unique protein chains: 3

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Attachment protein G3P	A [auth R], F [auth A], K [auth F], P [auth K], U [auth T]	406	Inovirus M13	Mutation(s): 0  Gene Names: III
UniProt
Find proteins for P69168 (Enterobacteria phage M13) Explore P69168  Go to UniProtKB:  P69168

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Capsid protein G8P	B [auth P], C [auth Q], D [auth S], G [auth B], H [auth C], I [auth D], L [auth G], M [auth H], N [auth I], Q [auth L], R [auth M], S [auth N], V, W, X	50	Inovirus M13	Mutation(s): 0  Gene Names: VIII
UniProt
Find proteins for P69541 (Enterobacteria phage M13) Explore P69541  Go to UniProtKB:  P69541

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
Head virion protein G6P	E [auth Z], J [auth E], O [auth J], T [auth O], Y	112	Inovirus M13	Mutation(s): 0  Gene Names: VI
UniProt
Find proteins for P69532 (Enterobacteria phage M13) Explore P69532  Go to UniProtKB:  P69532

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.30 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-01-03 
Deposition Author(s): Xiang, Y., Jia, Q.

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Funding Organization	Location	Grant Number
Ministry of Science and Technology (MoST, China)	China	--
National Natural Science Foundation of China (NSFC)	China	--

Revision History  

• Version 1.0: 2024-01-03
  Type: Initial release