8JFW | pdb_00008jfw

Cryo-EM structure of RDGC/apo-CaM complex

• PDB DOI: https://doi.org/10.2210/pdb8JFW/pdb
• EM Map EMD-36218: EMDB EMDataResource

• Classification: HYDROLASE
• Organism(s): Drosophila melanogaster
• Expression System: Spodoptera frugiperda
• Mutation(s): No 


• Deposited: 2023-05-19 Released: 2024-11-27 
• Deposition Author(s): Liu, Z.M., Liu, W., Wu, C., Liu, J.
• Funding Organization(s): National Science Foundation (NSF, China)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.64 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Cryo-EM structure of RDGC/apo-CaM complex

Liu, Z.M., Liu, W., Wu, C., Liu, J.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 2-mer - A1B1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 92.57 kDa 
• Atom Count: 6,076 
• Modeled Residue Count: 758 
• Deposited Residue Count: 810 
• Unique protein chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
AT15141p	A	149	Drosophila melanogaster	Mutation(s): 0  Gene Names: Cam-RB
UniProt
Find proteins for C6SUZ2 (Drosophila melanogaster) Explore C6SUZ2  Go to UniProtKB:  C6SUZ2

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Serine/threonine-protein phosphatase rdgC	B [auth D]	661	Drosophila melanogaster	Mutation(s): 0  Gene Names: rdgC, CG44746 EC: 3.1.3.16
UniProt
Find proteins for P40421 (Drosophila melanogaster) Explore P40421  Go to UniProtKB:  P40421

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN (Subject of Investigation/LOI)	D	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N
FE (Subject of Investigation/LOI)	C [auth D]	FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.64 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-11-27 
Deposition Author(s): Liu, Z.M., Liu, W., Wu, C., Liu, J.

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Funding Organization	Location	Grant Number
National Science Foundation (NSF, China)	China	--

Revision History  

• Version 1.0: 2024-11-27
  Type: Initial release
  
• Version 1.1: 2025-07-02
  Changes: Data collection