8J5Z

The cryo-EM structure of the TwOSC1 tetramer


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.75 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structural and Catalytic Insight into the Unique Pentacyclic Triterpene Synthase TwOSC.

Luo, Y.Ma, X.Qiu, Y.Lu, Y.Shen, S.Li, Y.Gao, H.Chen, K.Zhou, J.Hu, T.Tu, L.Zhao, H.Li, D.Leng, F.Gao, W.Jiang, T.Liu, C.Huang, L.Wu, R.Tong, Y.

(2023) Angew Chem Int Ed Engl 62: e202313429-e202313429

  • DOI: https://doi.org/10.1002/anie.202313429
  • Primary Citation of Related Structures:  
    8J5Z

  • PubMed Abstract: 

    The oxidosqualene cyclase (OSC) catalyzed cyclization of the linear substrate (3S)-2,3-oxidosqualene to form diverse pentacyclic triterpenoid (PT) skeletons is one of the most complex reactions in nature. Friedelin has a unique PT skeleton involving a fascinating nine-step cation shuttle run (CSR) cascade rearrangement reaction, in which the carbocation formed at C2 moves to the other side of the skeleton, runs back to C3 to yield a friedelin cation, which is finally deprotonated. However, as crystal structure data of plant OSCs are lacking, it remains unknown why the CSR cascade reactions occur in friedelin biosynthesis, as does the exact catalytic mechanism of the CSR. In this study, we determined the first cryogenic electron microscopy structure of a plant OSC, friedelin synthase, from Tripterygium wilfordii Hook. f (TwOSC). We also performed quantum mechanics/molecular mechanics simulations to reveal the energy profile for the CSR cascade reaction and identify key residues crucial for PT skeleton formation. Furthermore, we semirationally designed two TwOSC mutants, which significantly improved the yields of friedelin and β-amyrin, respectively.


  • Organizational Affiliation

    School of Traditional Chinese Medicine, Capital Medical University, Beijing, 100069, China.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Terpene cyclase/mutase family member
A, B, C, D
765Tripterygium wilfordiiMutation(s): 0 
Gene Names: OSC1
UniProt
Find proteins for A0A499QXI7 (Tripterygium wilfordii)
Explore A0A499QXI7 
Go to UniProtKB:  A0A499QXI7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A499QXI7
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.75 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Not funded--

Revision History  (Full details and data files)

  • Version 1.0: 2023-11-01
    Type: Initial release
  • Version 1.1: 2023-12-06
    Changes: Database references
  • Version 1.2: 2024-01-03
    Changes: Database references