8IWK

ABCG25 Wild Type purified with DDM plus CHS in ABA-bound state

PDB DOI: https://doi.org/10.2210/pdb8IWK/pdb
EM Map EMD-35769: EMDB EMDataResource

Classification: TRANSPORT PROTEIN
Organism(s): Arabidopsis thaliana
Expression System: Spodoptera frugiperda
Mutation(s): No

Deposited: 2023-03-30 Released: 2024-04-10
Deposition Author(s): Sun, L., Liu, X., Ying, W., Liao, L., Wei, H.
Funding Organization(s): Chinese Academy of Sciences

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.00 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

ABCG25 Wild Type purified with DDM plus CHS in ABA-bound state

Sun, L., Liu, X., Ying, W., Liao, L., Wei, H.

To be published.

Macromolecule Content

Total Structure Weight: 146.23 kDa
Atom Count: 8,479
Modelled Residue Count: 1,090
Deposited Residue Count: 1,324
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
ABC transporter G family member 25	A, B [auth C]	662	Arabidopsis thaliana	Mutation(s): 0 Gene Names: ABCG25
UniProt
Find proteins for Q84TH5 (Arabidopsis thaliana) Explore Q84TH5 Go to UniProtKB: Q84TH5
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q84TH5
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
A8S (Subject of Investigation/LOI) Query on A8S Download Ideal Coordinates CCD File SDF format, chain C MOL2 format, chain C	C	(2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid C₁₅ H₂₀ O₄ JLIDBLDQVAYHNE-YKALOCIXSA-N		Interactions Focus chain C Interactions & Density Focus chain C

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.00 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX	1.13_2998:

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2024-04-10

Deposition Author(s):

Funding Organization	Location	Grant Number
Chinese Academy of Sciences	China	XDB37020103

Revision History (Full details and data files)

Version 1.0: 2024-04-10
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.