8IL7

Structure of human soluble Adenylyl Cyclase in complex with lactate

• PDB DOI: https://doi.org/10.2210/pdb8IL7/pdb

• Classification: LYASE
• Organism(s): Homo sapiens
• Expression System: Trichoplusia ni
• Mutation(s): No 


• Deposited: 2023-03-02 Released: 2023-07-26 
• Deposition Author(s): Li, Q.J., Li, Z.L., Gao, P.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.95 Å
• R-Value Free: 0.189 
• R-Value Work: 0.163 
• R-Value Observed: 0.164 

Literature

Structure of human soluble Adenylyl Cyclase in complex with lactate

Li, Q.J., Li, Z.L., Gao, P.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C3  (Explore in 3D)
Global Stoichiometry: Homo 3-mer - A3 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: mass spectrometry

Macromolecule Content

• Total Structure Weight: 54.64 kDa 
• Atom Count: 3,958 
• Modelled Residue Count: 457 
• Deposited Residue Count: 475 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Adenylate cyclase type 10	A	475	Homo sapiens	Mutation(s): 0  Gene Names: ADCY10 EC: 4.6.1.1
UniProt & NIH Common Fund Data Resources
Find proteins for Q96PN6 (Homo sapiens) Explore Q96PN6  Go to UniProtKB:  Q96PN6
PHAROS:  Q96PN6 GTEx:  ENSG00000143199

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
GOL	C [auth A], D [auth A], E [auth A]	GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N
2OP (Subject of Investigation/LOI)	B [auth A]	(2S)-2-HYDROXYPROPANOIC ACID C3 H6 O3 JVTAAEKCZFNVCJ-REOHCLBHSA-N

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
CME	A	L-PEPTIDE LINKING	C5 H11 N O3 S2		CYS

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.95 Å
• R-Value Free: 0.189 
• R-Value Work: 0.163 
• R-Value Observed: 0.164 
• Space Group: P 6₃

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 99.28	α = 90
b = 99.28	β = 90
c = 98.564	γ = 120

Software Package:

Software Name	Purpose
HKL-2000	data scaling
HKL-2000	data reduction
PHENIX	phasing
PHENIX	refinement
Coot	model building

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2023-07-26 
Deposition Author(s): Li, Q.J., Li, Z.L., Gao, P.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	32130057

Revision History  

• Version 1.0: 2023-07-26
  Type: Initial release