Crystal structure of butanol dehydrogenase A (YqdH) in complex with NADH from Fusobacterium nucleatum
Bai, X., Lan, J., Bu, T.T., He, S.R., Zhang, J., Wang, L.L.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
NADH-dependent butanol dehydrogenase A | 385 | Fusobacterium nucleatum subsp. nucleatum ATCC 25586 | Mutation(s): 0  Gene Names: FN1415 EC: 1.1.1 | ||
UniProt | |||||
Find proteins for Q8R612 (Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355)) Explore Q8R612  Go to UniProtKB:  Q8R612 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8R612 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAD Query on NAD | C [auth A] | NICOTINAMIDE-ADENINE-DINUCLEOTIDE C21 H27 N7 O14 P2 BAWFJGJZGIEFAR-NNYOXOHSSA-N | |||
PO4 Query on PO4 | E [auth A] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
CO Query on CO | B [auth A] | COBALT (II) ION Co XLJKHNWPARRRJB-UHFFFAOYSA-N | |||
CL Query on CL | D [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 64.426 | α = 90 |
b = 79.351 | β = 90 |
c = 212.932 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-2000 | data scaling |
PHENIX | phasing |
HKL-2000 | data collection |
Funding Organization | Location | Grant Number |
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National Research Foundation (NRF, Korea) | Korea, Republic Of | NRF-2017M3A9F6029736 |