8HW0

the structure of AKR6D1

  • Classification: TOXIN
  • Organism(s): Devosia
  • Expression System: Escherichia coli
  • Mutation(s): No 

  • Deposited: 2022-12-28 Released: 2024-01-17 
  • Deposition Author(s): Chen, M., Yang, H.
  • Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.180 
  • R-Value Work: 0.175 
  • R-Value Observed: 0.175 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history. 


Literature

structure of AKR6D1

Chen, M., Yang, H., Lv, F.

To be published.

Macromolecules
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
NADPH-dependent aldo/keto reductase AKR6D1329DevosiaMutation(s): 0 
Gene Names: AKR6D1
UniProt
Find proteins for A0A6B8QIS5 (Devosia sp. D6-9)
Explore A0A6B8QIS5 
Go to UniProtKB:  A0A6B8QIS5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A6B8QIS5
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.180 
  • R-Value Work: 0.175 
  • R-Value Observed: 0.175 
  • Space Group: I 4 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 157.65α = 90
b = 157.65β = 90
c = 111.259γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
XDSdata scaling
PHENIXphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 


View more in-depth experimental data
Entry History & Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China--

Revision History  (Full details and data files)

  • Version 1.0: 2024-01-17
    Type: Initial release