8G8S

bipartite p52 NLS in complex with Importin alpha 2

PDB DOI: https://doi.org/10.2210/pdb8G8S/pdb

Classification: TRANSCRIPTION
Organism(s): Mus musculus, Homo sapiens
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2023-02-19 Released: 2024-02-21
Deposition Author(s): Tsimbslyuk, S., Stewart, M., Forwood, J.K.
Funding Organization(s): Not funded

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.10 Å
R-Value Free: 0.186
R-Value Work: 0.169
R-Value Observed: 0.170

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

p52 bipartite NLS in complex with Importin alpha 2

Tsimbslyuk, S., Stewart, M., Forwood, J.K.

To be published.

Macromolecule Content

Total Structure Weight: 59.5 kDa
Atom Count: 3,653
Modelled Residue Count: 443
Deposited Residue Count: 545
Unique protein chains: 2

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Importin subunit alpha-1	A	510	Mus musculus	Mutation(s): 0 Gene Names: Kpna2, Rch1
UniProt & NIH Common Fund Data Resources
Find proteins for P52293 (Mus musculus) Explore P52293 Go to UniProtKB: P52293
IMPC: MGI:103561
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P52293
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Nuclear factor NF-kappa-B p100 subunit isoform X1	B	35	Homo sapiens	Mutation(s): 0 Gene Names: NFKB2
UniProt
Find proteins for F1S861 (Sus scrofa) Explore F1S861 Go to UniProtKB: F1S861
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	F1S861
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.10 Å
R-Value Free: 0.186
R-Value Work: 0.169
R-Value Observed: 0.170
Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 77.066	α = 90
b = 88.583	β = 90
c = 96.671	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
DIALS	data reduction
Aimless	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2024-02-21

Deposition Author(s):

Funding Organization	Location	Grant Number
Not funded		--

Revision History (Full details and data files)

Version 1.0: 2024-02-21
Type: Initial release

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.