8G3D

48-nm doublet microtubule from Tetrahymena thermophila strain K40R


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.70 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Native doublet microtubules from Tetrahymena thermophila reveal the importance of outer junction proteins.

Kubo, S.Black, C.S.Joachimiak, E.Yang, S.K.Legal, T.Peri, K.Khalifa, A.A.Z.Ghanaeian, A.McCafferty, C.L.Valente-Paterno, M.De Bellis, C.Huynh, P.M.Fan, Z.Marcotte, E.M.Wloga, D.Bui, K.H.

(2023) Nat Commun 14: 2168-2168

  • DOI: https://doi.org/10.1038/s41467-023-37868-0
  • Primary Citation of Related Structures:  
    8G2Z, 8G3D

  • PubMed Abstract: 

    Cilia are ubiquitous eukaryotic organelles responsible for cellular motility and sensory functions. The ciliary axoneme is a microtubule-based cytoskeleton consisting of two central singlets and nine outer doublet microtubules. Cryo-electron microscopy-based studies have revealed a complex network inside the lumen of both tubules composed of microtubule-inner proteins (MIPs). However, the functions of most MIPs remain unknown. Here, we present single-particle cryo-EM-based analyses of the Tetrahymena thermophila native doublet microtubule and identify 42 MIPs. These data shed light on the evolutionarily conserved and diversified roles of MIPs. In addition, we identified MIPs potentially responsible for the assembly and stability of the doublet outer junction. Knockout of the evolutionarily conserved outer junction component CFAP77 moderately diminishes Tetrahymena swimming speed and beat frequency, indicating the important role of CFAP77 and outer junction stability in cilia beating generation and/or regulation.


  • Organizational Affiliation

    Department of Anatomy and Cell Biology, McGill University, Montreal, QC, Canada.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
RIB27AA [auth 0A],
KB [auth 3A],
NA [auth 2A],
P [auth 1A]
236Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
RIB38B [auth 0B]329Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
CFAM166BC [auth 0C],
R [auth 1C]
156Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
CFAM166AD [auth 0D],
QA [auth 2D],
S [auth 1D]
225Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
RIB22E [auth 0E],
OB [auth 3E],
RA [auth 2E],
T [auth 1E]
191Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
CFAM166CF [auth 0F]219Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP107G [auth 0G],
V [auth 1G]
183Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP127H [auth 0H],
W [auth 1H]
447Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP161ACA [auth 1N],
I [auth 0N],
ZA [auth 2N]
492Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP20195Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
Parkin co-regulated protein PACRGAEB [auth 2S],
HA [auth 1S],
K [auth 0S],
VB [auth 3S]
319Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
IJ34FB [auth 2T],
IA [auth 1T],
L [auth 0T],
WB [auth 3T]
298Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
Cilia- and flagella-associated protein 52GB [auth 2U],
JA [auth 1U],
M [auth 0U],
XB [auth 3U]
656Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
DNA polymerase delta C4-type zinc-finger proteinHB [auth 2V],
KA [auth 1V],
N [auth 0V],
YB [auth 3V]
269Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
RIB43A proteinGC [auth 4X],
JB [auth 2X],
MA [auth 1X],
O [auth 0X],
ZB [auth 3X]
142Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
RIB57LB [auth 3B],
OA [auth 2B],
Q [auth 1B]
498Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP182AU [auth 1F]173Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP143X [auth 1I]263Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP21AY [auth 1J]422Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
Cilia- and flagella-associated protein 53WA [auth 2K],
Z [auth 1K]
489Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP115AA [auth 1L],
RB [auth 3L],
XA [auth 2L]
940Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
Nucleoside diphosphate kinaseBA [auth 1M],
YA [auth 2M]
372Tetrahymena thermophilaMutation(s): 0 
UniProt
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Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
Cilia- and flagella-associated protein 45AB [auth 2O],
DA [auth 1O],
SB [auth 3O]
494Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP210BB [auth 2P],
EA [auth 1P]
507Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
RIB72BDB [auth 2R],
GA [auth 1R],
UB [auth 3R]
516Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
Protofilament ribbon proteinIB [auth 2W],
LA [auth 1W]
280Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
RIB35AC [auth 4C],
MB [auth 3C],
PA [auth 2C]
300Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP182BSA [auth 2F]96Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
Flagellar FliJ proteinTA [auth 2G]99Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
RIB27BCC [auth 4H],
PB [auth 3H],
UA [auth 2H]
229Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
STPG2QB [auth 3I],
VA [auth 2I]
293Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
RIB26NB [auth 3D]237Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP129BC [auth 4F]276Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
Flagellar microtugule protofilament ribbon proteinAD [auth 7R],
EC [auth 4R],
TC [auth 5R],
ZC [auth 6R]
613Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 35
MoleculeChains Sequence LengthOrganismDetailsImage
Parkin co-regulated protein PACRGBFC [auth 4S],
UC [auth 5S]
249Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
OJ2HC [auth 5A],
IC [auth 5B],
JC [auth 5C],
KC [auth 5D]
175Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP77ALC [auth 5E],
MC [auth 5F],
NC [auth 5G],
OC [auth 5H]
247Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
OJ3PC [auth 5I],
QC [auth 5J],
RC [auth 5K]
168Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
SB1VC [auth 6F]145Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
STPG1AWC [auth 6G]364Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
NebulinXC [auth 6H]518Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
B5B6_fMIPBD [auth 8L],
CD [auth 8N]
507Tetrahymena thermophilaMutation(s): 0 
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Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
CFAP112ADD [auth 8P]529Tetrahymena thermophilaMutation(s): 0 
Sequence Annotations
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Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
B2B3_fMIPED [auth 8R]361Tetrahymena thermophilaMutation(s): 0 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations
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Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
Tubulin alpha chain
BE [auth BI],
BF [auth DG],
BG [auth FE],
BH [auth HC],
BI [auth JA],
BJ [auth KM],
BK [auth MK],
BL [auth OI],
BM [auth QG],
BN [auth SE],
BO [auth UC],
BP [auth WA],
DE [auth BK],
DF [auth DI],
DG [auth FG],
DH [auth HE],
DI [auth JC],
DJ [auth LA],
DK [auth MM],
DL [auth OK],
DM [auth QI],
DN [auth SG],
DO [auth UE],
DP [auth WC],
FD [auth AA],
FE [auth BM],
FF [auth DK],
FG [auth FI],
FH [auth HG],
FI [auth JE],
FJ [auth LC],
FK [auth NA],
FL [auth OM],
FM [auth QK],
FN [auth SI],
FO [auth UG],
FP [auth WE],
HD [auth AC],
HE [auth CA],
HF [auth DM],
HG [auth FK],
HH [auth HI],
HI [auth JG],
HJ [auth LE],
HK [auth NC],
HL [auth PA],
HM [auth QM],
HN [auth SK],
HO [auth UI],
HP [auth WG],
JD [auth AE],
JE [auth CC],
JF [auth EA],
JG [auth FM],
JH [auth HK],
JI,
JJ [auth LG],
JK [auth NE],
JL [auth PC],
JM [auth RA],
JN [auth SM],
JO [auth UK],
JP [auth WI],
LD [auth AG],
LE [auth CE],
LF [auth EC],
LG [auth GA],
LH [auth HM],
LI [auth JK],
LJ [auth LI],
LK [auth NG],
LL [auth PE],
LM [auth RC],
LN [auth TA],
LO [auth UM],
LP [auth WK],
ND [auth AI],
NE [auth CG],
NF [auth EE],
NG [auth GC],
NH [auth IA],
NI [auth JM],
NJ [auth LK],
NK [auth NI],
NL [auth PG],
NM [auth RE],
NN [auth TC],
NO [auth VA],
NP [auth WM],
PD [auth AK],
PE [auth CI],
PF [auth EG],
PG [auth GE],
PH [auth IC],
PI [auth KA],
PJ [auth LM],
PK [auth NK],
PL [auth PI],
PM [auth RG],
PN [auth TE],
PO [auth VC],
RD [auth AM],
RE [auth CK],
RF [auth EI],
RG [auth GG],
RH [auth IE],
RI [auth KC],
RJ [auth MA],
RK [auth NM],
RL [auth PK],
RM [auth RI],
RN [auth TG],
RO [auth VE],
TD [auth BA],
TE [auth CM],
TF [auth EK],
TG [auth GI],
TH [auth IG],
TI [auth KE],
TJ [auth MC],
TK [auth OA],
TL [auth PM],
TM [auth RK],
TN [auth TI],
TO [auth VG],
VD [auth BC],
VE [auth DA],
VF [auth EM],
VG [auth GK],
VH [auth II],
VI [auth KG],
VJ [auth ME],
VK [auth OC],
VL [auth QA],
VM [auth RM],
VN [auth TK],
VO [auth VI],
XD [auth BE],
XE [auth DC],
XF [auth FA],
XG [auth GM],
XH [auth IK],
XI [auth KI],
XJ [auth MG],
XK [auth OE],
XL [auth QC],
XM [auth SA],
XN [auth TM],
XO [auth VK],
ZD [auth BG],
ZE [auth DE],
ZF [auth FC],
ZG [auth HA],
ZH [auth IM],
ZI [auth KK],
ZJ [auth MI],
ZK [auth OG],
ZL [auth QE],
ZM [auth SC],
ZN [auth UA],
ZO [auth VM]
449Tetrahymena thermophilaMutation(s): 1 
EC: 3.6.5
UniProt
Find proteins for P41351 (Tetrahymena thermophila)
Explore P41351 
Go to UniProtKB:  P41351
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP41351
Sequence Annotations
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Entity ID: 46
MoleculeChains Sequence LengthOrganismDetailsImage
Tubulin beta chain
AE [auth BH],
AF [auth DF],
AG [auth FD],
AH [auth HB],
AI [auth IN],
AJ [auth KL],
AK [auth MJ],
AL [auth OH],
AM [auth QF],
AN [auth SD],
AO [auth UB],
AP [auth VN],
CE [auth BJ],
CF [auth DH],
CG [auth FF],
CH [auth HD],
CI [auth JB],
CJ [auth KN],
CK [auth ML],
CL [auth OJ],
CM [auth QH],
CN [auth SF],
CO [auth UD],
CP [auth WB],
EE [auth BL],
EF [auth DJ],
EG [auth FH],
EH [auth HF],
EI [auth JD],
EJ [auth LB],
EK [auth MN],
EL [auth OL],
EM [auth QJ],
EN [auth SH],
EO [auth UF],
EP [auth WD],
GD [auth AB],
GE [auth BN],
GF [auth DL],
GG [auth FJ],
GH [auth HH],
GI [auth JF],
GJ [auth LD],
GK [auth NB],
GL [auth ON],
GM [auth QL],
GN [auth SJ],
GO [auth UH],
GP [auth WF],
ID [auth AD],
IE [auth CB],
IF [auth DN],
IG [auth FL],
IH [auth HJ],
II [auth JH],
IJ [auth LF],
IK [auth ND],
IL [auth PB],
IM [auth QN],
IN [auth SL],
IO [auth UJ],
IP [auth WH],
KD [auth AF],
KE [auth CD],
KF [auth EB],
KG [auth FN],
KH [auth HL],
KI [auth JJ],
KJ [auth LH],
KK [auth NF],
KL [auth PD],
KM [auth RB],
KN [auth SN],
KO [auth UL],
KP [auth WJ],
MD [auth AH],
ME [auth CF],
MF [auth ED],
MG [auth GB],
MH [auth HN],
MI [auth JL],
MJ [auth LJ],
MK [auth NH],
ML [auth PF],
MM [auth RD],
MN [auth TB],
MO [auth UN],
MP [auth WL],
OD [auth AJ],
OE [auth CH],
OF [auth EF],
OG [auth GD],
OH [auth IB],
OI [auth JN],
OJ [auth LL],
OK [auth NJ],
OL [auth PH],
OM [auth RF],
ON [auth TD],
OO [auth VB],
OP [auth WN],
QD [auth AL],
QE [auth CJ],
QF [auth EH],
QG [auth GF],
QH [auth ID],
QI [auth KB],
QJ [auth LN],
QK [auth NL],
QL [auth PJ],
QM [auth RH],
QN [auth TF],
QO [auth VD],
SD [auth AN],
SE [auth CL],
SF [auth EJ],
SG [auth GH],
SH [auth IF],
SI [auth KD],
SJ [auth MB],
SK [auth NN],
SL [auth PL],
SM [auth RJ],
SN [auth TH],
SO [auth VF],
UD [auth BB],
UE [auth CN],
UF [auth EL],
UG [auth GJ],
UH [auth IH],
UI [auth KF],
UJ [auth MD],
UK [auth OB],
UL [auth PN],
UM [auth RL],
UN [auth TJ],
UO [auth VH],
WD [auth BD],
WE [auth DB],
WF [auth EN],
WG [auth GL],
WH [auth IJ],
WI [auth KH],
WJ [auth MF],
WK [auth OD],
WL [auth QB],
WM [auth RN],
WN [auth TL],
WO [auth VJ],
YD [auth BF],
YE [auth DD],
YF [auth FB],
YG [auth GN],
YH [auth IL],
YI [auth KJ],
YJ [auth MH],
YK [auth OF],
YL [auth QD],
YM [auth SB],
YN [auth TN],
YO [auth VL]
443Tetrahymena thermophilaMutation(s): 0 
UniProt
Find proteins for P41352 (Tetrahymena thermophila)
Explore P41352 
Go to UniProtKB:  P41352
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP41352
Sequence Annotations
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  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
GTP (Subject of Investigation/LOI)
Query on GTP

Download Ideal Coordinates CCD File 
ABA [auth OC]
AEA [auth RM]
AHA [auth VI]
AS [auth DA]
AV [auth GK]
ABA [auth OC],
AEA [auth RM],
AHA [auth VI],
AS [auth DA],
AV [auth GK],
AY [auth KG],
BCA [auth PG],
BFA [auth TC],
BIA [auth WM],
BQ [auth AI],
BT [auth EE],
BW [auth IA],
BZ [auth LK],
CAA [auth NA],
CDA [auth QK],
CGA [auth UG],
CR [auth BM],
CU [auth FI],
CX [auth JE],
DBA [auth OE],
DEA [auth SA],
DHA [auth VK],
DS [auth DC],
DV [auth GM],
DY [auth KI],
ECA [auth PI],
EFA [auth TE],
EQ [auth AK],
ET [auth EG],
EW [auth IC],
EZ [auth LM],
FAA [auth NC],
FDA [auth QM],
FGA [auth UI],
FR [auth CA],
FU [auth FK],
FX [auth JG],
GBA [auth OG],
GHA [auth VM],
GS [auth DE],
GV [auth HA],
GY [auth KK],
HCA [auth PK],
HEA [auth SC],
HFA [auth TG],
HQ [auth AM],
HT [auth EI],
HW [auth IE],
HZ [auth MA],
IAA [auth NE],
IDA [auth RA],
IGA [auth UK],
IR [auth CC],
IU [auth FM],
IX [auth JI],
JBA [auth OI],
JEA [auth SE],
JHA [auth WA],
JS [auth DG],
JV [auth HC],
JY [auth KM],
KCA [auth PM],
KFA [auth TI],
KQ [auth BA],
KT [auth EK],
KW [auth IG],
KZ [auth MC],
LAA [auth NG],
LDA [auth RC],
LGA [auth UM],
LR [auth CE],
LU [auth GA],
LX [auth JK],
MBA [auth OK],
MEA [auth SG],
MHA [auth WC],
MS [auth DI],
MV [auth HE],
MY [auth LA],
NCA [auth QA],
NFA [auth TK],
NQ [auth BC],
NT [auth EM],
NW [auth II],
NZ [auth ME],
OAA [auth NI],
ODA [auth RE],
OGA [auth VA],
OR [auth CG],
OU [auth GC],
OX [auth JM],
PBA [auth OM],
PEA [auth SI],
PHA [auth WE],
PP [auth AA],
PS [auth DK],
PV [auth HG],
PY [auth LC],
QCA [auth QC],
QFA [auth TM],
QQ [auth BE],
QT [auth FA],
QZ [auth MG],
RAA [auth NK],
RGA [auth VC],
RR [auth CI],
RU [auth GE],
RW [auth IK],
RX [auth KA],
SBA [auth PA],
SDA [auth RG],
SEA [auth SK],
SHA [auth WG],
SP [auth AC],
SS [auth DM],
SV [auth HI],
SY [auth LE],
TCA [auth QE],
TFA [auth UA],
TQ [auth BG],
TT [auth FC],
TW [auth IM],
TZ [auth MI],
UAA [auth NM],
UDA [auth RI],
UGA [auth VE],
UR [auth CK],
UU [auth GG],
UX [auth KC],
VBA [auth PC],
VEA [auth SM],
VHA [auth WI],
VP [auth AE],
VS [auth EA],
VV [auth HK],
VY [auth LG],
WCA [auth QG],
WFA [auth UC],
WQ [auth BI],
WT [auth FE],
WW [auth JA],
WZ [auth MK],
XAA [auth OA],
XDA [auth RK],
XGA [auth VG],
XR [auth CM],
XU [auth GI],
XX [auth KE],
YBA [auth PE],
YEA [auth TA],
YHA [auth WK],
YP [auth AG],
YS [auth EC],
YV [auth HM],
YY [auth LI],
ZCA [auth QI],
ZFA [auth UE],
ZQ [auth BK],
ZT [auth FG],
ZW [auth JC],
ZZ [auth MM]
GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
GDP (Subject of Investigation/LOI)
Query on GDP

Download Ideal Coordinates CCD File 
ACA [auth PF]
AFA [auth TB]
AIA [auth WL]
AQ [auth AH]
AT [auth ED]
ACA [auth PF],
AFA [auth TB],
AIA [auth WL],
AQ [auth AH],
AT [auth ED],
AW [auth HN],
AZ [auth LJ],
BAA [auth MN],
BDA [auth QJ],
BGA [auth UF],
BR [auth BL],
BU [auth FH],
BX [auth JD],
CBA [auth OD],
CEA [auth RN],
CHA [auth VJ],
CS [auth DB],
CV [auth GL],
CY [auth KH],
DCA [auth PH],
DFA [auth TD],
DIA [auth WN],
DQ [auth AJ],
DT [auth EF],
DW [auth IB],
DZ [auth LL],
EAA [auth NB],
EDA [auth QL],
EGA [auth UH],
ER [auth BN],
EU [auth FJ],
EX [auth JF],
FBA [auth OF],
FEA [auth SB],
FHA [auth VL],
FS [auth DD],
FV [auth GN],
FY [auth KJ],
GCA [auth PJ],
GFA [auth TF],
GQ [auth AL],
GT [auth EH],
GW [auth ID],
GZ [auth LN],
HAA [auth ND],
HDA [auth QN],
HGA [auth UJ],
HR [auth CB],
HU [auth FL],
HX [auth JH],
IBA [auth OH],
IEA [auth SD],
IHA [auth VN],
IS [auth DF],
IV [auth HB],
IY [auth KL],
JCA [auth PL],
JFA [auth TH],
JQ [auth AN],
JT [auth EJ],
JW [auth IF],
JZ [auth MB],
KAA [auth NF],
KDA [auth RB],
KGA [auth UL],
KR [auth CD],
KU [auth FN],
KX [auth JJ],
LBA [auth OJ],
LEA [auth SF],
LHA [auth WB],
LS [auth DH],
LV [auth HD],
LY [auth KN],
MCA [auth PN],
MFA [auth TJ],
MQ [auth BB],
MT [auth EL],
MW [auth IH],
MZ [auth MD],
NAA [auth NH],
NDA [auth RD],
NGA [auth UN],
NR [auth CF],
NU [auth GB],
NX [auth JL],
OBA [auth OL],
OEA [auth SH],
OHA [auth WD],
OS [auth DJ],
OV [auth HF],
OY [auth LB],
PCA [auth QB],
PFA [auth TL],
PQ [auth BD],
PT [auth EN],
PW [auth IJ],
PZ [auth MF],
QAA [auth NJ],
QDA [auth RF],
QGA [auth VB],
QR [auth CH],
QU [auth GD],
QX [auth JN],
RBA [auth ON],
REA [auth SJ],
RHA [auth WF],
RP [auth AB],
RS [auth DL],
RV [auth HH],
RY [auth LD],
SCA [auth QD],
SFA [auth TN],
SQ [auth BF],
ST [auth FB],
SW [auth IL],
SZ [auth MH],
TAA [auth NL],
TDA [auth RH],
TGA [auth VD],
TR [auth CJ],
TU [auth GF],
TX [auth KB],
UBA [auth PB],
UEA [auth SL],
UHA [auth WH],
UP [auth AD],
US [auth DN],
UV [auth HJ],
UY [auth LF],
VCA [auth QF],
VFA [auth UB],
VQ [auth BH],
VT [auth FD],
VW [auth IN],
VZ [auth MJ],
WAA [auth NN],
WDA [auth RJ],
WGA [auth VF],
WR [auth CL],
WU [auth GH],
WX [auth KD],
XBA [auth PD],
XEA [auth SN],
XHA [auth WJ],
XP [auth AF],
XS [auth EB],
XV [auth HL],
XY [auth LH],
YCA [auth QH],
YFA [auth UD],
YQ [auth BJ],
YT [auth FF],
YW [auth JB],
YZ [auth ML],
ZAA [auth OB],
ZDA [auth RL],
ZGA [auth VH],
ZR [auth CN],
ZU [auth GJ],
ZX [auth KF]
GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
MG (Subject of Investigation/LOI)
Query on MG

Download Ideal Coordinates CCD File 
AAA [auth MM]
ADA [auth QI]
AGA [auth UE]
AR [auth BK]
AU [auth FG]
AAA [auth MM],
ADA [auth QI],
AGA [auth UE],
AR [auth BK],
AU [auth FG],
AX [auth JC],
BBA [auth OC],
BEA [auth RM],
BHA [auth VI],
BS [auth DA],
BV [auth GK],
BY [auth KG],
CCA [auth PG],
CFA [auth TC],
CIA [auth WM],
CQ [auth AI],
CT [auth EE],
CW [auth IA],
CZ [auth LK],
DAA [auth NB],
DDA [auth QK],
DGA [auth UG],
DR [auth BM],
DU [auth FI],
DX [auth JE],
EBA [auth OE],
EEA [auth SA],
EHA [auth VK],
ES [auth DC],
EV [auth GM],
EY [auth KI],
FCA [auth PI],
FFA [auth TE],
FQ [auth AL],
FT [auth EG],
FW [auth IC],
FZ [auth LM],
GAA [auth NC],
GDA [auth QM],
GEA [auth SB],
GGA [auth UI],
GR [auth CA],
GU [auth FK],
GX [auth JG],
HBA [auth OG],
HHA [auth VM],
HS [auth DE],
HV [auth HA],
HY [auth KK],
ICA [auth PK],
IFA [auth TG],
IQ [auth AM],
IT [auth EI],
IW [auth IE],
IZ [auth MA],
JAA [auth NE],
JDA [auth RA],
JGA [auth UK],
JR [auth CC],
JU [auth FM],
JX [auth JI],
KBA [auth OI],
KEA [auth SE],
KHA [auth WA],
KS [auth DG],
KV [auth HC],
KY [auth KM],
LCA [auth PM],
LFA [auth TI],
LQ [auth BB],
LT [auth EK],
LW [auth IG],
LZ [auth MC],
MAA [auth NG],
MDA [auth RC],
MGA [auth UM],
MR [auth CE],
MU [auth GB],
MX [auth JK],
NBA [auth OK],
NEA [auth SG],
NHA [auth WC],
NS [auth DI],
NV [auth HE],
NY [auth LA],
OCA [auth QA],
OFA [auth TK],
OQ [auth BC],
OT [auth EM],
OW [auth II],
OZ [auth ME],
PAA [auth NI],
PDA [auth RE],
PGA [auth VA],
PR [auth CG],
PU [auth GC],
PX [auth JM],
QBA [auth OM],
QEA [auth SI],
QHA [auth WE],
QP [auth AA],
QS [auth DK],
QV [auth HG],
QW [auth IK],
QY [auth LC],
RCA [auth QC],
RDA [auth RF],
RFA [auth TM],
RQ [auth BE],
RT [auth FA],
RZ [auth MG],
SAA [auth NK],
SGA [auth VC],
SR [auth CI],
SU [auth GE],
SX [auth KA],
TBA [auth PA],
TEA [auth SK],
THA [auth WG],
TP [auth AC],
TS [auth DM],
TV [auth HI],
TY [auth LE],
UCA [auth QE],
UFA [auth UA],
UQ [auth BG],
UT [auth FC],
UW [auth IM],
UZ [auth MI],
VAA [auth NM],
VDA [auth RI],
VGA [auth VE],
VR [auth CK],
VU [auth GG],
VX [auth KC],
WBA [auth PC],
WEA [auth SM],
WHA [auth WI],
WP [auth AE],
WS [auth EA],
WV [auth HK],
WY [auth LG],
XCA [auth QG],
XFA [auth UC],
XQ [auth BI],
XT [auth FE],
XW [auth JA],
XZ [auth MK],
YAA [auth OA],
YDA [auth RK],
YGA [auth VG],
YR [auth CM],
YU [auth GI],
YX [auth KE],
ZBA [auth PE],
ZEA [auth TA],
ZHA [auth WK],
ZP [auth AG],
ZS [auth EC],
ZV [auth HM],
ZY [auth LI]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.70 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Canadian Institutes of Health Research (CIHR)Canada--

Revision History  (Full details and data files)

  • Version 1.0: 2023-06-14
    Type: Initial release