Crystallographic characterization of sodium ions in a bacterial leucine/sodium symporter
Karasawa, A., Liu, H., Quick, M., Hendrickson, W.A., Liu, Q.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Na(+):neurotransmitter symporter (Snf family) | 520 | Aquifex aeolicus | Mutation(s): 0  Gene Names: snf Membrane Entity: Yes  | ||
UniProt | |||||
Find proteins for O67854 (Aquifex aeolicus (strain VF5)) Explore O67854  Go to UniProtKB:  O67854 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O67854 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
BOG Query on BOG | F [auth A] G [auth A] H [auth A] I [auth A] J [auth A] | octyl beta-D-glucopyranoside C14 H28 O6 HEGSGKPQLMEBJL-RKQHYHRCSA-N | |||
LEU (Subject of Investigation/LOI) Query on LEU | E [auth A] | LEUCINE C6 H13 N O2 ROHFNLRQFUQHCH-YFKPBYRVSA-N | |||
CL (Subject of Investigation/LOI) Query on CL | D [auth A], L [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | |||
NA (Subject of Investigation/LOI) Query on NA | B [auth A], C [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 87.11 | α = 90 |
b = 86.383 | β = 95.533 |
c = 80.73 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
DIALS | data reduction |
Aimless | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | GM116799 |